Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13f14
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF220422-1|AAG36789.1|  572|Drosophila melanogaster PASILLA spli...    29   5.8  
AE014297-935|ABI31155.1|  572|Drosophila melanogaster CG8144-PH,...    29   5.8  
AE014297-934|ABI31153.1|  572|Drosophila melanogaster CG8144-PG,...    29   5.8  
AE014297-933|AAF54380.2|  572|Drosophila melanogaster CG8144-PF,...    29   5.8  

>AF220422-1|AAG36789.1|  572|Drosophila melanogaster PASILLA splice
           variant 3 protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 21/47 (44%), Positives = 23/47 (48%)
 Frame = -3

Query: 165 MEASPRRMPNTGQSGAVGKRALVLDRENASLKRNPTTSVSFCCSGIE 25
           ME  P   P TG S    KR L  D EN   KR+  +S    CSGIE
Sbjct: 7   METCPS--PETGDSR---KRPLDSDPENEQTKRSHFSSGESVCSGIE 48


>AE014297-935|ABI31155.1|  572|Drosophila melanogaster CG8144-PH,
           isoform H protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 21/47 (44%), Positives = 23/47 (48%)
 Frame = -3

Query: 165 MEASPRRMPNTGQSGAVGKRALVLDRENASLKRNPTTSVSFCCSGIE 25
           ME  P   P TG S    KR L  D EN   KR+  +S    CSGIE
Sbjct: 7   METCPS--PETGDSR---KRPLDSDPENEQTKRSHFSSGESVCSGIE 48


>AE014297-934|ABI31153.1|  572|Drosophila melanogaster CG8144-PG,
           isoform G protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 21/47 (44%), Positives = 23/47 (48%)
 Frame = -3

Query: 165 MEASPRRMPNTGQSGAVGKRALVLDRENASLKRNPTTSVSFCCSGIE 25
           ME  P   P TG S    KR L  D EN   KR+  +S    CSGIE
Sbjct: 7   METCPS--PETGDSR---KRPLDSDPENEQTKRSHFSSGESVCSGIE 48


>AE014297-933|AAF54380.2|  572|Drosophila melanogaster CG8144-PF,
           isoform F protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 21/47 (44%), Positives = 23/47 (48%)
 Frame = -3

Query: 165 MEASPRRMPNTGQSGAVGKRALVLDRENASLKRNPTTSVSFCCSGIE 25
           ME  P   P TG S    KR L  D EN   KR+  +S    CSGIE
Sbjct: 7   METCPS--PETGDSR---KRPLDSDPENEQTKRSHFSSGESVCSGIE 48


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,705,101
Number of Sequences: 53049
Number of extensions: 600987
Number of successful extensions: 1318
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)