Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13f09
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z78198-3|CAB01569.1| 1010|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z92813-6|CAB07289.1|  627|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z68159-11|CAI79134.1|  117|Caenorhabditis elegans Hypothetical p...    28   5.9  
U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical
           protein T02E9.1 protein.
          Length = 376

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -2

Query: 262 YMILVSLTNLIQNEITVTVHFAIKVINTTKDWFVLIG-AIDRYTARCTASVSK 107
           YMIL    N +  E+   +HF +++ N     F+L   A DRY A C   + +
Sbjct: 86  YMIL---NNWVFGELVCKIHFMLELSNKMCSTFILTALAFDRYMAICHPEIKR 135


>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical
           protein ZC53.4 protein.
          Length = 1410

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 161 YKPILCRIYYLNSKMNSDSNFILNQIRQRHENHVDTIN 274
           Y  I+ +I  +NS    + NF+LN IR+R   + D +N
Sbjct: 778 YMKIITKI--INSFFEKNKNFVLNDIRKRVTKYSDYVN 813


>Z78198-3|CAB01569.1| 1010|Caenorhabditis elegans Hypothetical
           protein F55C5.4 protein.
          Length = 1010

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/41 (31%), Positives = 26/41 (63%)
 Frame = +2

Query: 281 GENSHAAQIKMRALLVALLGVSMSACAFASQPVELELDDDD 403
           GE++    I++ +  +  + VS+SA  F ++PVE E ++D+
Sbjct: 700 GEHNQDFLIQLTSTFLNCVNVSLSAYDFKTRPVEFEDEEDN 740


>Z92813-6|CAB07289.1|  627|Caenorhabditis elegans Hypothetical
           protein T28A8.6 protein.
          Length = 627

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 269 INAVGENSHAAQIK--MRALLVALLGVSMSACAFASQPVELELDDDDVTQKL 418
           I + G N+   ++K  M      LLG+  S      Q V  +LD+ DVT+K+
Sbjct: 557 IKSTGSNNSTMKVKDFMFKFKFFLLGLDCSELLELQQKVHEKLDEQDVTKKI 608


>Z68159-11|CAI79134.1|  117|Caenorhabditis elegans Hypothetical
           protein C33D9.10 protein.
          Length = 117

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +2

Query: 200 KMNSDSNFILNQIRQRHENHVDTINAVGENSHAAQIK 310
           ++  DS  ++NQ+   ++NH + +N +  +   A+IK
Sbjct: 18  QLQQDSEHVINQMDLENQNHKNKMNDLSPDEKKAEIK 54


>U21310-5|AAY86191.1|  148|Caenorhabditis elegans Hypothetical
           protein F40H6.6 protein.
          Length = 148

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = -2

Query: 571 SSTXTPPRLLRHHSDK*KQGCHCRQKCTGFSISNNKPDRGLRNSSSETDVTQFLRDVIVV 392
           + T  P   L HH+     GC+      GF+     P RGL      T+   ++   +V+
Sbjct: 53  AGTVAPKAPLIHHNHHTGDGCNSN---FGFNDHRLLPPRGLETCERTTEKRTYIDQHVVI 109

Query: 391 QL*LDW 374
           +L  D+
Sbjct: 110 RLIFDF 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,018,485
Number of Sequences: 27780
Number of extensions: 250406
Number of successful extensions: 740
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)