BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13f04
(626 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton anti... 24 3.4
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 6.0
AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transpo... 23 6.0
AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transpo... 23 6.0
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 23 6.0
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 23 6.0
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 23 6.0
DQ080895-1|AAY89541.1| 120|Anopheles gambiae olfactory receptor... 23 7.9
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 23 7.9
>EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton
antiporter protein.
Length = 647
Score = 24.2 bits (50), Expect = 3.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 386 FGRRKTWLVPVQYLIGIVMIIVSYCVTDWLGIDGE 490
FG L + LIG++M+ + + W+ +DGE
Sbjct: 192 FGGFLISLTTLPRLIGMLMVGILFQNVGWVNLDGE 226
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 23.4 bits (48), Expect = 6.0
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -3
Query: 468 SVTQYDTIIITIPIKYWTGTSQVFLLPNSGQNIASTIGAHNSFTLKGQFTKLNSA 304
+V ++D + T+PI W L P NI I + LKG + SA
Sbjct: 553 AVIEWDPLTDTVPIHCWIHPWTELLGPKMEGNIYPAIREKLARALKGWHPEDRSA 607
>AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.4 bits (48), Expect = 6.0
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 388 WKKKNLACTRPVLDWNSND 444
W+ + L C +P DW D
Sbjct: 598 WRDRLLHCFKPTHDWGPED 616
>AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.4 bits (48), Expect = 6.0
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 388 WKKKNLACTRPVLDWNSND 444
W+ + L C +P DW D
Sbjct: 598 WRDRLLHCFKPTHDWGPED 616
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 6.0
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -3
Query: 432 PIKYWTGTSQVFLLPNSGQNIASTI-GAHNSFTLKGQFTKLNSACCVYV 289
P + WTG PNS I T+ G T+ T L S C+Y+
Sbjct: 211 PAEKWTGVLNTTTPPNSCVQIVDTVFGDFPGATMWNPNTPL-SEDCLYI 258
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 6.0
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -3
Query: 432 PIKYWTGTSQVFLLPNSGQNIASTI-GAHNSFTLKGQFTKLNSACCVYV 289
P + WTG PNS I T+ G T+ T L S C+Y+
Sbjct: 211 PAEKWTGVLNTTTPPNSCVQIVDTVFGDFPGATMWNPNTPL-SEDCLYI 258
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 23.4 bits (48), Expect = 6.0
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -3
Query: 432 PIKYWTGTSQVFLLPNSGQNIASTI-GAHNSFTLKGQFTKLNSACCVYV 289
P + WTG PNS I T+ G T+ T L S C+Y+
Sbjct: 97 PAEKWTGVLNTTTPPNSCVQIVDTVFGDFPGATMWNPNTPL-SEDCLYI 144
>DQ080895-1|AAY89541.1| 120|Anopheles gambiae olfactory receptor 38
protein.
Length = 120
Score = 23.0 bits (47), Expect = 7.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 377 WPEFGRRKTWLVPVQYLIGIVMIIVSYCV 463
WP R + W V V LI + +I ++ C+
Sbjct: 35 WPPDRRTRRWYVKV--LIAVNLITLAICI 61
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 23.0 bits (47), Expect = 7.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 263 PMLLQNKGITYTQQAEFSLVNWPFSVKL 346
PM L N + T+Q F WP + L
Sbjct: 564 PMALSNINLPETEQFRFCNCGWPHHLLL 591
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,016
Number of Sequences: 2352
Number of extensions: 12779
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -