Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13f04
         (626 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D88152-1|BAA20072.1|  549|Homo sapiens acetyl-coenzyme A transpo...   196   7e-50
BC014416-1|AAH14416.1|  549|Homo sapiens SLC33A1 protein protein.     196   7e-50
BC011982-1|AAH11982.1|  412|Homo sapiens major facilitator super...    67   4e-11
AF026247-2|AAC52078.1|   75|Homo sapiens HERV-E envelope glycopr...    30   5.8  
AF026246-2|AAC52076.1|   75|Homo sapiens HERV-E envelope glycopr...    30   5.8  

>D88152-1|BAA20072.1|  549|Homo sapiens acetyl-coenzyme A
           transporter protein.
          Length = 549

 Score =  196 bits (477), Expect = 7e-50
 Identities = 92/144 (63%), Positives = 113/144 (78%), Gaps = 1/144 (0%)
 Frame = +2

Query: 197 NIAVLLFLYTLQGIPLGLAGAVPMLLQNKGITYTQQAEFSLVNWPFSVKLLWAPIVDAMF 376
           +I +LLFLY LQGIPLGLAG++P++LQ+K ++YT QA FS V WPFS+KLLWAP+VDA++
Sbjct: 74  SILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVY 133

Query: 377 WPEFGRRKTWLVPVQYLIGIVMIIVSYCVTDWLG-IDGEPPSMTILTVSFLLLNFLAATQ 553
              FGRRK+WLVP QY++G+ MI +S  V   LG  D   P +  LTV+F L  FLAATQ
Sbjct: 134 VKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVAFFLFEFLAATQ 193

Query: 554 DIAVDGWALTMLKRCNVGHASTCN 625
           DIAVDGWALTML R NVG+ASTCN
Sbjct: 194 DIAVDGWALTMLSRENVGYASTCN 217


>BC014416-1|AAH14416.1|  549|Homo sapiens SLC33A1 protein protein.
          Length = 549

 Score =  196 bits (477), Expect = 7e-50
 Identities = 92/144 (63%), Positives = 113/144 (78%), Gaps = 1/144 (0%)
 Frame = +2

Query: 197 NIAVLLFLYTLQGIPLGLAGAVPMLLQNKGITYTQQAEFSLVNWPFSVKLLWAPIVDAMF 376
           +I +LLFLY LQGIPLGLAG++P++LQ+K ++YT QA FS V WPFS+KLLWAP+VDA++
Sbjct: 74  SILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVY 133

Query: 377 WPEFGRRKTWLVPVQYLIGIVMIIVSYCVTDWLG-IDGEPPSMTILTVSFLLLNFLAATQ 553
              FGRRK+WLVP QY++G+ MI +S  V   LG  D   P +  LTV+F L  FLAATQ
Sbjct: 134 VKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVAFFLFEFLAATQ 193

Query: 554 DIAVDGWALTMLKRCNVGHASTCN 625
           DIAVDGWALTML R NVG+ASTCN
Sbjct: 194 DIAVDGWALTMLSRENVGYASTCN 217


>BC011982-1|AAH11982.1|  412|Homo sapiens major facilitator
           superfamily domain containing 3 protein.
          Length = 412

 Score = 67.3 bits (157), Expect = 4e-11
 Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
 Frame = +2

Query: 218 LYTLQGIPLGL-AGAVPMLLQNKGITYTQQAEFSLVNWPFSVKLLWAPIVDAMFWPEFGR 394
           LY +QG+P GL +G +P+LL+  G++ T+     ++  P+ +KL WAP+VDA      G 
Sbjct: 11  LYLVQGLPYGLQSGLLPVLLRAGGLSLTRVGLAKVLYAPWLLKLAWAPLVDAQ-----GS 65

Query: 395 RKTWLVPVQYLIGIVMIIVSYCVTDWLGIDGEPPSMTILTVSFLLLNFLAATQDIAVDGW 574
            + W+      +G+V  +++       G  G P ++  L    LLLN  AA QD+A+D  
Sbjct: 66  ARAWVTRSTAGLGLVCGLLAGLPPPGAGQAGLPAAVAGL---LLLLNLGAAMQDVALDAL 122

Query: 575 ALTMLKRCNVGHAST 619
           A+ +L+   +G  +T
Sbjct: 123 AVQLLEPAELGPGNT 137


>AF026247-2|AAC52078.1|   75|Homo sapiens HERV-E envelope
           glycoprotein protein.
          Length = 75

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 296 CTLCLYFVKALGQ-LQLIPVVYPVMCIGTTKQLCL 195
           C+ C++ V  +GQ ++ I + Y   C+GT K+ CL
Sbjct: 25  CSQCIHQVTEVGQQIKTIFLFYSYECMGTLKETCL 59


>AF026246-2|AAC52076.1|   75|Homo sapiens HERV-E envelope
           glycoprotein protein.
          Length = 75

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 296 CTLCLYFVKALGQ-LQLIPVVYPVMCIGTTKQLCL 195
           C+ C++ V  +GQ ++ I + Y   C+GT K+ CL
Sbjct: 25  CSQCIHQVTEVGQQIKTIFLFYSYECMGTLKETCL 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,419,488
Number of Sequences: 237096
Number of extensions: 1891468
Number of successful extensions: 3272
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3268
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)