Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13f01
         (678 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC042923-1|AAH42923.1| 2541|Homo sapiens talin 1 protein.              31   5.0  
AL133410-5|CAI10978.1| 2429|Homo sapiens talin 1 protein.              31   5.0  
AF178534-1|AAF27330.1| 2540|Homo sapiens talin protein.                31   5.0  
AF177198-1|AAF23322.1| 2541|Homo sapiens talin protein.                31   5.0  
AF078828-1|AAD13152.1| 2541|Homo sapiens talin protein.                31   5.0  
AB028950-1|BAA82979.2| 2550|Homo sapiens KIAA1027 protein protein.     31   5.0  

>BC042923-1|AAH42923.1| 2541|Homo sapiens talin 1 protein.
          Length = 2541

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +1

Query: 247 KSYEDLLRQAQDSTTDDDLLR---VSEEMFNADINNAFNYIQVNLQGKTTPMSRNDEAQS 417
           K+ E  +  +Q +T D  LLR    +       +N    +++ +  G   P  R D+A  
Sbjct: 745 KAVEGCVSASQAATEDGQLLRGVGAAATAVTQALNELLQHVKAHATG-AGPAGRYDQATD 803

Query: 418 NLLNVPENVWS 450
            +L V EN++S
Sbjct: 804 TILTVTENIFS 814


>AL133410-5|CAI10978.1| 2429|Homo sapiens talin 1 protein.
          Length = 2429

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +1

Query: 247 KSYEDLLRQAQDSTTDDDLLR---VSEEMFNADINNAFNYIQVNLQGKTTPMSRNDEAQS 417
           K+ E  +  +Q +T D  LLR    +       +N    +++ +  G   P  R D+A  
Sbjct: 745 KAVEGCVSASQAATEDGQLLRGVGAAATAVTQALNELLQHVKAHATG-AGPAGRYDQATD 803

Query: 418 NLLNVPENVWS 450
            +L V EN++S
Sbjct: 804 TILTVTENIFS 814


>AF178534-1|AAF27330.1| 2540|Homo sapiens talin protein.
          Length = 2540

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +1

Query: 247 KSYEDLLRQAQDSTTDDDLLR---VSEEMFNADINNAFNYIQVNLQGKTTPMSRNDEAQS 417
           K+ E  +  +Q +T D  LLR    +       +N    +++ +  G   P  R D+A  
Sbjct: 745 KAVEGCVSASQAATEDGQLLRGVGAAATAVTQALNELLQHVKAHATG-AGPAGRYDQATD 803

Query: 418 NLLNVPENVWS 450
            +L V EN++S
Sbjct: 804 TILTVTENIFS 814


>AF177198-1|AAF23322.1| 2541|Homo sapiens talin protein.
          Length = 2541

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +1

Query: 247 KSYEDLLRQAQDSTTDDDLLR---VSEEMFNADINNAFNYIQVNLQGKTTPMSRNDEAQS 417
           K+ E  +  +Q +T D  LLR    +       +N    +++ +  G   P  R D+A  
Sbjct: 745 KAVEGCVSASQAATEDGQLLRGVGAAATAVTQALNELLQHVKAHATG-AGPAGRYDQATD 803

Query: 418 NLLNVPENVWS 450
            +L V EN++S
Sbjct: 804 TILTVTENIFS 814


>AF078828-1|AAD13152.1| 2541|Homo sapiens talin protein.
          Length = 2541

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +1

Query: 247 KSYEDLLRQAQDSTTDDDLLR---VSEEMFNADINNAFNYIQVNLQGKTTPMSRNDEAQS 417
           K+ E  +  +Q +T D  LLR    +       +N    +++ +  G   P  R D+A  
Sbjct: 745 KAVEGCVSASQAATEDGQLLRGVGAAATAVTQALNELLQHVKAHATG-AGPAGRYDQATD 803

Query: 418 NLLNVPENVWS 450
            +L V EN++S
Sbjct: 804 TILTVTENIFS 814


>AB028950-1|BAA82979.2| 2550|Homo sapiens KIAA1027 protein protein.
          Length = 2550

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +1

Query: 247 KSYEDLLRQAQDSTTDDDLLR---VSEEMFNADINNAFNYIQVNLQGKTTPMSRNDEAQS 417
           K+ E  +  +Q +T D  LLR    +       +N    +++ +  G   P  R D+A  
Sbjct: 754 KAVEGCVSASQAATEDGQLLRGVGAAATAVTQALNELLQHVKAHATG-AGPAGRYDQATD 812

Query: 418 NLLNVPENVWS 450
            +L V EN++S
Sbjct: 813 TILTVTENIFS 823


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,386,000
Number of Sequences: 237096
Number of extensions: 1848336
Number of successful extensions: 3799
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3799
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)