Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13e24
         (681 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031642-1|AAH31642.1|  526|Homo sapiens TBC1 domain family, mem...    33   0.94 
AK001944-1|BAA91992.1|  526|Homo sapiens protein ( Homo sapiens ...    33   0.94 

>BC031642-1|AAH31642.1|  526|Homo sapiens TBC1 domain family, member
           19 protein.
          Length = 526

 Score = 33.1 bits (72), Expect = 0.94
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 18/74 (24%)
 Frame = -3

Query: 448 QILYCSSR---VFAYFAYQNACP----------FQEYILFYCGIGIQPGRGYNVFV---- 320
           Q+L C SR   V ++FA+ +A P           +EY +FY   G+ P  G++++V    
Sbjct: 318 QVLLCFSRDTSVLSHFAFNSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLC 377

Query: 319 -IYFNSQALYKIYR 281
            +Y     LY+I+R
Sbjct: 378 FLYHEPSKLYQIFR 391


>AK001944-1|BAA91992.1|  526|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11082 fis, clone PLACE1005206. ).
          Length = 526

 Score = 33.1 bits (72), Expect = 0.94
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 18/74 (24%)
 Frame = -3

Query: 448 QILYCSSR---VFAYFAYQNACP----------FQEYILFYCGIGIQPGRGYNVFV---- 320
           Q+L C SR   V ++FA+ +A P           +EY +FY   G+ P  G++++V    
Sbjct: 318 QVLLCFSRDTSVLSHFAFNSASPPKSYIRGKLGLEEYAVFYPPNGVIPFHGFSMYVAPLC 377

Query: 319 -IYFNSQALYKIYR 281
            +Y     LY+I+R
Sbjct: 378 FLYHEPSKLYQIFR 391


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,993,902
Number of Sequences: 237096
Number of extensions: 2207430
Number of successful extensions: 7973
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7972
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)