Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13e21
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10401-7|AAA19056.1|  504|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z47068-6|CAA87334.2|  272|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81457-1|CAB03812.1|  423|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z72509-5|CAA96649.1|  294|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>U10401-7|AAA19056.1|  504|Caenorhabditis elegans Hypothetical
           protein T20B12.3 protein.
          Length = 504

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 27  NLHHNSFYCKIFLLTNPKYTYLNKKPS 107
           N  +  FY K++ LTNP   Y+++K S
Sbjct: 262 NFEYPKFYDKVYSLTNPSLLYMSQKES 288


>Z47068-6|CAA87334.2|  272|Caenorhabditis elegans Hypothetical
           protein F15G9.5 protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/63 (26%), Positives = 26/63 (41%)
 Frame = -3

Query: 577 GTRALFLPFHCLLPRRSATTFDHYSRVSSEFRLILKQVNTFRCRGSTIASKCDLDAETNC 398
           G   +FL F  L    +A+  +H + + S    I  +     CR +T  S C L     C
Sbjct: 9   GGDIIFLMFTTLAAVSTASEHEHRTHMCSAEGNICSENAATVCRNNTCVSACSLRGMQEC 68

Query: 397 KLD 389
           + D
Sbjct: 69  ECD 71


>Z81457-1|CAB03812.1|  423|Caenorhabditis elegans Hypothetical
           protein C01G12.1 protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 288 ILRSGDGTHHVLGNDEAKSAVSAIGP 211
           +L   D THH++ ND++ S+ SA  P
Sbjct: 378 LLDETDDTHHIVDNDDSCSSPSAHSP 403


>Z72509-5|CAA96649.1|  294|Caenorhabditis elegans Hypothetical
           protein F32G8.5 protein.
          Length = 294

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/57 (26%), Positives = 25/57 (43%)
 Frame = -3

Query: 517 FDHYSRVSSEFRLILKQVNTFRCRGSTIASKCDLDAETNCKLD*SRSCGVRQTGPPG 347
           F++YS  +  + ++  Q+N       T  S+     E  C    + +C V   GPPG
Sbjct: 46  FNYYS--TDAWEMMSNQINNSPPSQPTYFSRLARSTEQKCNCSQANNCPVGPPGPPG 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,080,539
Number of Sequences: 27780
Number of extensions: 351479
Number of successful extensions: 848
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)