Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13e20
         (458 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   2.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.1  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    22   2.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   3.7  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   6.4  

>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 400 FHDYTKNYSHTYPVLYWKL 456
           +++Y  NY++ Y  LY+ +
Sbjct: 337 YNNYNNNYNNNYKKLYYNI 355


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 332 ITLAKHEKDQIPEVLATTAPT*GNLSALFSE*FS 231
           +TLAK EK   P  +     + GNL  +++  FS
Sbjct: 297 LTLAKMEKTSKPLPMVDNPESTGNLVYIYNNPFS 330


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 138 EFYHNTNCQDCYDY*HCQY 82
           E Y   +CQ  Y Y  C Y
Sbjct: 115 EEYTGDDCQKTYQYVQCHY 133


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 397 LFHDYTKNYSHTYPVL 444
           L H YT++ S TY VL
Sbjct: 253 LVHLYTRDQSETYDVL 268


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 285 HYCANVRKSFRVVQ*IVLFE 226
           H CA  R++F+ +Q   +FE
Sbjct: 254 HACAEYRRNFKKMQEEKIFE 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,952
Number of Sequences: 438
Number of extensions: 2860
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)