Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13e18
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537972-1|CAD97936.1| 345|Homo sapiens hypothetical protein pr... 66 1e-10
BC084545-1|AAH84545.1| 296|Homo sapiens LYSMD4 protein protein. 47 5e-05
BC033515-1|AAH33515.1| 215|Homo sapiens LysM, putative peptidog... 47 5e-05
AY125955-1|AAM94507.1| 215|Homo sapiens putative peptidoglycan ... 47 5e-05
BC031649-1|AAH31649.1| 227|Homo sapiens LysM, putative peptidog... 46 2e-04
AL592424-6|CAI16380.1| 227|Homo sapiens LysM, putative peptidog... 46 2e-04
BC073134-1|AAH73134.1| 505|Homo sapiens KIAA1787 protein protein. 33 0.87
AL136870-1|CAB66804.1| 1514|Homo sapiens hypothetical protein pr... 33 0.87
AB058690-1|BAB47416.1| 1564|Homo sapiens KIAA1787 protein protein. 33 0.87
BC058027-1|AAH58027.1| 127|Homo sapiens LYSMD3 protein protein. 30 6.1
BC036062-1|AAH36062.1| 776|Homo sapiens protocadherin beta 16 p... 30 8.1
AY013878-1|AAK21988.1| 776|Homo sapiens protocadherin beta 8a p... 30 8.1
AF282973-2|AAG10030.1| 776|Homo sapiens protocadherin-3x protein. 30 8.1
AF217757-1|AAF81914.1| 776|Homo sapiens protocadherin 3X protein. 30 8.1
AB046841-1|BAB13447.1| 787|Homo sapiens KIAA1621 protein protein. 30 8.1
>BX537972-1|CAD97936.1| 345|Homo sapiens hypothetical protein
protein.
Length = 345
Score = 66.1 bits (154), Expect = 1e-10
Identities = 27/53 (50%), Positives = 41/53 (77%)
Frame = +3
Query: 285 VQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPVTPYSVLTELI 443
+QEGDTL AIAL++ C++A++KR+N + D + FA R+IK+PV +S LTE +
Sbjct: 108 IQEGDTLNAIALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKKFSSLTETL 160
>BC084545-1|AAH84545.1| 296|Homo sapiens LYSMD4 protein protein.
Length = 296
Score = 47.2 bits (107), Expect = 5e-05
Identities = 14/55 (25%), Positives = 39/55 (70%)
Frame = +3
Query: 273 IEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPVTPYSVLTE 437
++ ++ + D+L +AL++ C +A++K++N ++ +++A +++K+PV + +L E
Sbjct: 74 LQRELAQEDSLNKLALQYGCKVADIKKVNNFIREQDLYALKSVKIPVRNHGILME 128
>BC033515-1|AAH33515.1| 215|Homo sapiens LysM, putative
peptidoglycan-binding, domain containing 2 protein.
Length = 215
Score = 47.2 bits (107), Expect = 5e-05
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = +3
Query: 264 EHFIEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPV 413
E +E +V+ GDTLQ IAL++ ++ ++KR N++ ++ IF ++T+ +PV
Sbjct: 68 ERHVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLNIPV 117
>AY125955-1|AAM94507.1| 215|Homo sapiens putative peptidoglycan
binding domain protein-like protein protein.
Length = 215
Score = 47.2 bits (107), Expect = 5e-05
Identities = 19/50 (38%), Positives = 36/50 (72%)
Frame = +3
Query: 264 EHFIEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPV 413
E +E +V+ GDTLQ IAL++ ++ ++KR N++ ++ IF ++T+ +PV
Sbjct: 68 ERHVEHRVRAGDTLQGIALKYGVTMEQIKRANKLFTNDCIFLKKTLNIPV 117
>BC031649-1|AAH31649.1| 227|Homo sapiens LysM, putative
peptidoglycan-binding, domain containing 1 protein.
Length = 227
Score = 45.6 bits (103), Expect = 2e-04
Identities = 16/51 (31%), Positives = 37/51 (72%)
Frame = +3
Query: 261 QEHFIEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPV 413
+E +E Q++ GDTL +AL++ ++ ++KR N+++ ++ IF ++T+ +P+
Sbjct: 36 RERRLEHQLEPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPI 86
>AL592424-6|CAI16380.1| 227|Homo sapiens LysM, putative
peptidoglycan-binding, domain containing 1 protein.
Length = 227
Score = 45.6 bits (103), Expect = 2e-04
Identities = 16/51 (31%), Positives = 37/51 (72%)
Frame = +3
Query: 261 QEHFIEAQVQEGDTLQAIALRFYCSIAELKRINQIHKDNEIFARRTIKVPV 413
+E +E Q++ GDTL +AL++ ++ ++KR N+++ ++ IF ++T+ +P+
Sbjct: 36 RERRLEHQLEPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIPI 86
>BC073134-1|AAH73134.1| 505|Homo sapiens KIAA1787 protein protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.87
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 470 FNLETNAKIDTATLTKQWHTAVTSKQFTAKR 562
FNL N +++ TLTK+WH A A R
Sbjct: 342 FNLRVNPRLEAGTLTKKWHMAYHGSNVAAVR 372
>AL136870-1|CAB66804.1| 1514|Homo sapiens hypothetical protein
protein.
Length = 1514
Score = 33.1 bits (72), Expect = 0.87
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 470 FNLETNAKIDTATLTKQWHTAVTSKQFTAKR 562
FNL N +++ TLTK+WH A A R
Sbjct: 1351 FNLRVNPRLEAGTLTKKWHMAYHGSNVAAVR 1381
>AB058690-1|BAB47416.1| 1564|Homo sapiens KIAA1787 protein protein.
Length = 1564
Score = 33.1 bits (72), Expect = 0.87
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 470 FNLETNAKIDTATLTKQWHTAVTSKQFTAKR 562
FNL N +++ TLTK+WH A A R
Sbjct: 1401 FNLRVNPRLEAGTLTKKWHMAYHGSNVAAVR 1431
>BC058027-1|AAH58027.1| 127|Homo sapiens LYSMD3 protein protein.
Length = 127
Score = 30.3 bits (65), Expect = 6.1
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +3
Query: 285 VQEGDTLQAIALRFYCSI 338
+QEGDTL AIAL++ C++
Sbjct: 69 IQEGDTLNAIALQYCCTV 86
>BC036062-1|AAH36062.1| 776|Homo sapiens protocadherin beta 16
protein.
Length = 776
Score = 29.9 bits (64), Expect = 8.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 129 PFFTMKQRTRVMHSGDDLISYDVMNNKKNDDNGRSDIQLYKIKPQEHF 272
P FT K+ + L + +N+ + D G +++Q YKI P HF
Sbjct: 131 PMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHF 178
>AY013878-1|AAK21988.1| 776|Homo sapiens protocadherin beta 8a
protein.
Length = 776
Score = 29.9 bits (64), Expect = 8.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 129 PFFTMKQRTRVMHSGDDLISYDVMNNKKNDDNGRSDIQLYKIKPQEHF 272
P FT K+ + L + +N+ + D G +++Q YKI P HF
Sbjct: 131 PMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHF 178
>AF282973-2|AAG10030.1| 776|Homo sapiens protocadherin-3x protein.
Length = 776
Score = 29.9 bits (64), Expect = 8.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 129 PFFTMKQRTRVMHSGDDLISYDVMNNKKNDDNGRSDIQLYKIKPQEHF 272
P FT K+ + L + +N+ + D G +++Q YKI P HF
Sbjct: 131 PMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHF 178
>AF217757-1|AAF81914.1| 776|Homo sapiens protocadherin 3X protein.
Length = 776
Score = 29.9 bits (64), Expect = 8.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 129 PFFTMKQRTRVMHSGDDLISYDVMNNKKNDDNGRSDIQLYKIKPQEHF 272
P FT K+ + L + +N+ + D G +++Q YKI P HF
Sbjct: 131 PMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHF 178
>AB046841-1|BAB13447.1| 787|Homo sapiens KIAA1621 protein protein.
Length = 787
Score = 29.9 bits (64), Expect = 8.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 129 PFFTMKQRTRVMHSGDDLISYDVMNNKKNDDNGRSDIQLYKIKPQEHF 272
P FT K+ + L + +N+ + D G +++Q YKI P HF
Sbjct: 142 PMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHF 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,321,985
Number of Sequences: 237096
Number of extensions: 1502451
Number of successful extensions: 3578
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3578
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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