Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13e15
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1235.08c |pdh1||DUF1751 family protein|Schizosaccharomyces p... 28 1.0
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 27 2.3
SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2 alpha-1,... 26 5.4
SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting... 25 7.2
SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|ch... 25 7.2
SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr... 25 9.5
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 25 9.5
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 25 9.5
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 25 9.5
>SPCC1235.08c |pdh1||DUF1751 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 226
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -3
Query: 493 SANALHFFSSILFPLGCKSVKNTCDLQQYACFIQNVICNPYHLQPY 356
S + + F S + C +V TC + Y F+ V+ +HL+ +
Sbjct: 176 SIHLFYVFQSFPWTYFCLAVSGTCISELYVLFVHPVVQELFHLESH 221
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 359 RLEVVRIADDILDKA--CILL*VTCIFNTFTAKRKQDGRKEMQCISRISN 502
RLE+ ++ +D CILL V N +TA++++D K S I N
Sbjct: 272 RLEIFLAMENQIDAGFLCILLMVLAFGNQYTAEQQEDVSKSNFHASNIGN 321
>SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2
alpha-1,3-glucosyltransferase Alg12 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 546
Score = 25.8 bits (54), Expect = 5.4
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = -1
Query: 552 LQQSPFLHFPSQVSFLLLDILLMHCISFLPSCF---RLAVKVLKIHVTYNNMHALSKMSS 382
L + L FP V + L + +S++PS F LA + ++++ +M+++S S
Sbjct: 51 LSKYDHLEFPGAVKRSFIPSLFIAVLSYIPSWFVNPLLAARWTIGYLSWESMNSVSCSIS 110
Query: 381 AILTTSSLTKVVSYVAVAFFKFSHFSRSCDGVHG 280
T S + + F + SR + G
Sbjct: 111 KRFGTLSGALFILFSCAQFHLVYYMSRPLSNIFG 144
>SPAC19G12.01c |cut20|lid1, apc4, SPAPJ698.04c|anaphase-promoting
complex subunit Apc4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 719
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 477 CNALAEYLIAKKRLDLENEEKEIVVAKLKLDFVCSPTLSYLKNNLDSFI 623
C L L + + + K + KL C TL YL+NN+ SF+
Sbjct: 368 CERLTVLLSSARGKSIWGHMKGNTLLDAKLVEDCLATLGYLQNNVFSFL 416
>SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 775
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 459 KMEEKKCNALAEYLIAKKRLDLENEEKEIVVAKLKLDFVCSPTLSYLKNNLDSFIE 626
++E+ K YL K + L + +K KL DF+ P+LS + +FI+
Sbjct: 259 QLEKSKQGLAIGYLQQAKSI-LSSAQKLFNGIKLSTDFIHKPSLSDYPQTISTFIK 313
>SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 25.0 bits (52), Expect = 9.5
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +3
Query: 390 FWIKHAYCCRSHVFL 434
F ++H +CCR H ++
Sbjct: 65 FIVRHIHCCRCHTYI 79
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/47 (21%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 459 CFRLAVKVLKIHVTYNNMHALSKMSSA-ILTTSSLTKVVSYVAVAFF 322
C+ L ++ +H + N+H KM+ A ++ ++L ++ + F+
Sbjct: 368 CYILTFSLMILHTDFFNIHNRQKMTRAEFISNTNLPTILPEILECFY 414
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 441 LQPSGNKMEEKKCNALAEYLIAKKRLDLENEEKEIVVAKLKLDFVCSPTLSYLKNNLDSF 620
L+ S + E+K + + KRL +ENE+ + LK + +Y + N
Sbjct: 822 LEFSVGEKEKKAAEYSLLHTFSYKRLSMENEKPDTTKVPLKYNIQHEEMKAYRRKN---D 878
Query: 621 IEFIKRNF 644
+E+I ++F
Sbjct: 879 LEYIDQHF 886
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 375 GLQMTFWIKHAYCCRSHVFLTLLQPSGNKMEEKKC 479
G ++T W H YC + +LLQ G+ E +C
Sbjct: 162 GSELTAWSTHQYC---EMVRSLLQSMGHSPELVQC 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,606,364
Number of Sequences: 5004
Number of extensions: 52362
Number of successful extensions: 135
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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