Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13e02
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    27   0.13 
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    25   0.69 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.8  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   2.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.4  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   8.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.5  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.5  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 405 QSEFECPVCSKIFKVYSWAWKHIQKYHCIDEKGN 506
           +  F CP+C+K F       KH++ ++   +KG+
Sbjct: 372 EKRFACPICNKRFMRSDHLAKHVKTHNGNGKKGS 405


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 114 LRSQRLTCKCDTCALGFKNVQALRSH 191
           +R+  L CKC  C   F     L+ H
Sbjct: 1   IRTHTLPCKCTICPKAFSRPWLLQGH 26


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 331 VEAFSDVLFILWATFITFLWGISFLLAITSVLGRYAILFFSGWATAWCERN 179
           +EAF    F L A  +  +   ++ L    V+  +A+ FFS W  A    N
Sbjct: 7   LEAFKLNTFFLKALTVWHVENPTYRLYKIFVVFSFAVTFFSAWICALVNYN 57


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 369 CIFLINCVAVIFLSKHFRMFCSF 301
           C F+I  V ++FL   +  FC+F
Sbjct: 151 CAFIIFTVHLLFLLCIYHFFCAF 173



 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 372 CCIFLINCVAVIFLSKHFRMFCS 304
           CC F+I  + ++FL   +  +C+
Sbjct: 269 CCAFIIFTMHLLFLLCIYYFYCA 291


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 331 VEAFSDVLFILWATFITFLWG 269
           V A +D +   W T+ T+ WG
Sbjct: 19  VSATTDKVVCYWGTWSTYRWG 39


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/40 (25%), Positives = 26/40 (65%)
 Frame = -1

Query: 319 SDVLFILWATFITFLWGISFLLAITSVLGRYAILFFSGWA 200
           ++++F+L+ T+  F+W  + ++ + +   +YA+ FF  +A
Sbjct: 117 TNIIFVLFHTYEAFVW--TRIMGV-AYYEQYAVEFFQFYA 153


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +1

Query: 472 SRNIIALTRKGTLF-YQHRKI 531
           +R ++A  R+G LF Y H++I
Sbjct: 219 AREVVAKNRRGELFYYMHQQI 239


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 405 QSEFECPVCSKIFKVYSWAWKHIQKY 482
           +  F CPVC + F   S    H++ +
Sbjct: 47  EKPFRCPVCDRRFSQSSSVTTHMRTH 72


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 405 QSEFECPVCSKIFKVYSWAWKHIQKY 482
           +  F CPVC + F   S    H++ +
Sbjct: 303 EKPFRCPVCDRRFSQSSSVTTHMRTH 328


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/31 (22%), Positives = 14/31 (45%)
 Frame = -2

Query: 372 CCIFLINCVAVIFLSKHFRMFCSFYGPLLLP 280
           CC   +N  +++  +++    C F G    P
Sbjct: 728 CCAICVNATSLVESNRNVPQKCIFNGQAYFP 758


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 333  LSKHFRMFCSFYGPLLLPFYGV 268
            LSK  + F   YG  LL F+G+
Sbjct: 1311 LSKLIKSFNEIYGVPLLLFFGL 1332


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +3

Query: 141 CDTCALGFKNVQALRSH 191
           CD C   F+    LR H
Sbjct: 110 CDICGKAFRRQDHLRDH 126


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 583 FINTLQAMQRSIRTGLIISFDVGKTGFPFSSMQ 485
           FINT + +    +T  +I+FD+    F  S ++
Sbjct: 10  FINTTKLLLWCDQTIGLITFDINTPSFKLSKIR 42



 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/41 (17%), Positives = 20/41 (48%)
 Frame = -1

Query: 361 LNKLCGCDFFVEAFSDVLFILWATFITFLWGISFLLAITSV 239
           LNK+C     +     +    +   +  ++G+SF++ + ++
Sbjct: 502 LNKICALHHHLSKLVKLFNETFGIVLLLMFGVSFVVIVITI 542


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +2

Query: 518 NIERYNQASSYRTLHRL*CINKVR*SYXWYIILYVL 625
           N++  ++    R  H    +  V   +  Y+ILY+L
Sbjct: 113 NLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYIL 148


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/41 (17%), Positives = 20/41 (48%)
 Frame = -1

Query: 361 LNKLCGCDFFVEAFSDVLFILWATFITFLWGISFLLAITSV 239
           LNK+C     +     +    +   +  ++G+SF++ + ++
Sbjct: 227 LNKICALHHHLSKLVKLFNETFGIVLLLMFGVSFVVIVITI 267


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 308 QNIRKCFDKKITATQFIKK 364
           +NIR+ +D+    TQF+ K
Sbjct: 337 RNIREDYDRLARLTQFLDK 355


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +2

Query: 518 NIERYNQASSYRTLHRL*CINKVR*SYXWYIILYVL 625
           N++  ++    R  H    +  V   +  Y+ILY+L
Sbjct: 113 NLQYIDEVLKNRDSHETNLLRNVSVQFFVYVILYIL 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,204
Number of Sequences: 336
Number of extensions: 3839
Number of successful extensions: 23
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)