Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13e02
(631 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 34 0.11
08_02_1057 + 23995782-23996446,23998026-23998167,23998242-239994... 33 0.25
08_02_1114 - 24388807-24388932,24390941-24390970,24391044-243911... 31 0.75
03_05_0711 + 27051991-27052368,27053032-27053265,27055429-270556... 30 1.7
06_03_1478 - 30420097-30420651 29 2.3
02_05_0202 + 26708049-26709074 29 2.3
06_03_0611 - 22721977-22722276,22722765-22722853,22722978-227230... 29 3.0
04_04_0734 + 27648661-27649596 29 3.0
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 29 3.0
08_02_1172 + 24898290-24899141,24900864-24901328 29 4.0
01_06_1167 - 35062766-35062870,35063165-35063228,35063647-350637... 29 4.0
11_06_0047 + 19595904-19596185,19596284-19596424,19597195-195973... 28 5.3
09_04_0564 + 18565583-18566449,18569662-18570123 28 5.3
06_03_1230 + 28575661-28575728,28575791-28575861,28575978-285761... 28 5.3
05_04_0019 + 17197271-17197445,17197937-17198067,17198129-171981... 28 5.3
01_06_0873 + 32617428-32617532,32618166-32618234,32619195-326193... 28 5.3
07_03_1151 + 24385272-24386543 28 7.0
06_03_0913 + 25913231-25913609,25913702-25913775,25914400-259145... 28 7.0
02_01_0624 - 4681834-4682298,4684250-4684398,4684479-4684557,468... 28 7.0
01_07_0303 + 42615578-42615709,42616273-42616312,42616393-426164... 28 7.0
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 28 7.0
08_02_0366 - 16301133-16302592,16302702-16302750 27 9.3
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 27 9.3
03_02_0435 - 8406262-8406419,8406499-8406547,8406577-8407458,840... 27 9.3
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 27 9.3
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +3
Query: 399 GKQSEFECPVCSKIFKVYSWAWKHI---QKYH 485
GK +FECPVC+K F+ S + H+ KYH
Sbjct: 362 GKDGKFECPVCNKTFEEQSRYFGHVGSHAKYH 393
>08_02_1057 +
23995782-23996446,23998026-23998167,23998242-23999486,
23999521-23999529
Length = 686
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 399 GKQSEFECPVCSKIFKVYSWAWKHI 473
GK +FECPVC+K F+ S + HI
Sbjct: 356 GKDGKFECPVCNKTFEEQSRYFGHI 380
>08_02_1114 -
24388807-24388932,24390941-24390970,24391044-24391100,
24391231-24391393,24391487-24391614,24391697-24391802,
24391912-24391991,24392118-24392215,24392491-24392631,
24392738-24392822,24393556-24393693
Length = 383
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +3
Query: 243 EVIAKRKLIPHKKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQSEFEC 422
+++ KR+ PH+ V+ + + ST K KT P +D + C
Sbjct: 256 QLLGKRRGFPHRTVLPPPVRDFQQYYGCSTVKETQSTSYGSLQKKTSAPKQDSDIGDQTC 315
Query: 423 PVC 431
P+C
Sbjct: 316 PIC 318
>03_05_0711 +
27051991-27052368,27053032-27053265,27055429-27055687,
27055956-27056149
Length = 354
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 367 YFLNKLCGCDFFVEAFSDVLFILWATFITFLWG 269
Y++N + G + + FSDVL + TFI L+G
Sbjct: 176 YYVNPMLGATYTPDQFSDVLMQPFTTFIEGLYG 208
>06_03_1478 - 30420097-30420651
Length = 184
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 141 CDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAK 257
CD C F+ QAL H+A +H KK ++ K +AK
Sbjct: 110 CDRCKAPFETRQALGGHRA-SHSTKKGCSWHAKQLAMAK 147
>02_05_0202 + 26708049-26709074
Length = 341
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 381 PIPSEDGKQSEFECPVCSKIFKVY 452
P+P K++ F+CP C K+F+ Y
Sbjct: 190 PVPE---KRTRFQCPACKKVFRSY 210
>06_03_0611 -
22721977-22722276,22722765-22722853,22722978-22723083,
22723178-22723306,22723803-22723887,22723994-22724103,
22724424-22724624,22725033-22725394,22725612-22725695,
22725791-22725916,22725999-22726161,22726378-22726536,
22727147-22727274,22727371-22727493,22727755-22727899,
22727992-22728068,22728318-22728696,22729325-22729411
Length = 950
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 90 FYVQHSFQLGHKSVFFSLFK 31
+Y+ HS +GHKS F SL K
Sbjct: 558 YYLDHSASVGHKSSFLSLIK 577
>04_04_0734 + 27648661-27649596
Length = 311
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 381 PIPSEDGKQSEFECPVCSKIFKVY 452
P + K++ F+CP C K+F+ Y
Sbjct: 163 PAAAAAQKRTRFQCPACKKVFRSY 186
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 126 RLTCKCDTCALGFKNVQALRSHQAVAHPLK 215
R C C C F +L HQA+ H +K
Sbjct: 238 RELCACSQCGEVFNKADSLEHHQAIRHAVK 267
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Frame = +3
Query: 339 SQPHNLLRKYNTKTPIPSEDG-KQSEFECPVCSKIFKVYS----WAWKHIQKYHCIDEKG 503
S P L K P PS+ ++F CPVC K F Y+ W H +Y E
Sbjct: 242 STPIGKLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESL 301
Query: 504 NPVLPTS 524
V PT+
Sbjct: 302 RGVQPTA 308
>01_06_1167 -
35062766-35062870,35063165-35063228,35063647-35063738,
35064137-35064205,35064322-35064412,35064509-35064732,
35065064-35065180,35065583-35065651,35066172-35066237,
35066335-35066505,35066581-35066661,35067620-35067700
Length = 409
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 276 KKVIKVAHKMNKTSENASTKKSQPHNLLRKYNTKTPIPSEDGKQS 410
KKV+ + K+ N +KK+ P N + N P P+++ K S
Sbjct: 171 KKVVSGQKNVGKSDANVDSKKAAPENKAPE-NKANPTPAKNNKPS 214
>11_06_0047 +
19595904-19596185,19596284-19596424,19597195-19597307,
19597970-19598049,19598557-19598720,19598931-19599060,
19599155-19599254,19599452-19599500,19599775-19599849,
19600026-19600124,19600745-19600823,19600897-19601045,
19601334-19601393,19601490-19601684
Length = 571
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 516 PTSKDIIKPVRIERCIACNVLIKSDDHTC 602
PT K II+P+R + C C ++ DH C
Sbjct: 375 PTCK-IIRPMRSKHCPTCKHCVEQFDHHC 402
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 28.3 bits (60), Expect = 5.3
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Frame = +3
Query: 339 SQPHNLLRKYNTKTPIPSEDG-KQSEFECPVCSKIFKVYS----WAWKHIQKYHCIDEKG 503
S P L K P PS+ ++F CPVC K F Y+ W H +Y E
Sbjct: 247 STPIGRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESL 306
Query: 504 NPVLPTS 524
+ PT+
Sbjct: 307 RGIQPTA 313
>06_03_1230 +
28575661-28575728,28575791-28575861,28575978-28576188,
28576339-28576495
Length = 168
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = +3
Query: 159 GFKNVQALRSHQAVAH----PLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSENA 326
GF L+ H VA PL +Y+ V + K + +K MNKT EN
Sbjct: 91 GFSYEDRLKPHIPVATDRVLPLSLASSYKGMRLVTLQSKEKAAR--LKSLRAMNKTVENM 148
Query: 327 STKKSQPHNLLRKYNTKTP 383
TK +N++RK P
Sbjct: 149 RTKIGMKNNVIRKLPKNCP 167
>05_04_0019 +
17197271-17197445,17197937-17198067,17198129-17198164,
17198196-17198333,17198503-17198601,17198750-17199124
Length = 317
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 141 CDTCALGFKNVQALRSHQAVAHPLKKRIAYRPKTEVIAKRKLIPHKKVIKVAHK 302
C ALG + + S + HPL + + + E+I K K++P K VI A K
Sbjct: 101 CKGLALGSNLMAYMISEKVKPHPLVVTLLTQVE-EIIPKWKIVPTKDVIDSAFK 153
>01_06_0873 +
32617428-32617532,32618166-32618234,32619195-32619380,
32619687-32619776,32620389-32620462,32621149-32621260,
32621413-32621468,32621826-32621880,32621965-32622021,
32622696-32622797,32623467-32623547,32623756-32623808,
32625245-32625314,32626540-32626603,32627339-32627487,
32627564-32627719,32628011-32628108,32628763-32628847,
32628932-32628997,32629066-32629125,32629408-32629494,
32630307-32630360,32630538-32630576,32630651-32630779,
32630859-32630911,32630984-32631032,32632240-32632298,
32633111-32633259,32633338-32633492,32633719-32633847,
32633932-32634017,32634220-32634335,32634429-32634541,
32635335-32635458,32635540-32635658,32636289-32636490,
32636586-32636757,32637852-32638176,32638442-32638529,
32638970-32639059,32639169-32639370,32639681-32639705
Length = 1450
Score = 28.3 bits (60), Expect = 5.3
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +3
Query: 105 PGKLRSQRLTCKCDTCALGFKNVQALRSHQAVAHPLKKRI--AYRPKTEVIA--KRKL-I 269
PG + + L + D+ L KNVQALR+ VAH L + ++ E +A R +
Sbjct: 531 PGSKKVEMLVDQRDSIILTPKNVQALRTLFNVAHRLHNVLGPSWVLVLETLAALDRAIHS 590
Query: 270 PHKKVIKVAHKMNKTSENASTKKSQPHNL 356
PH +V+ +++ S + S + S H L
Sbjct: 591 PHASTQEVSASVSRLSRDTSGQYSDFHIL 619
>07_03_1151 + 24385272-24386543
Length = 423
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 351 NLLRKYNTKTPIPSEDGKQSEFECPVCSKIFKVY 452
N + + P + K++ +ECP C K+F Y
Sbjct: 273 NSISSKKKQQPRAAAPAKRTRYECPGCGKVFASY 306
>06_03_0913 +
25913231-25913609,25913702-25913775,25914400-25914540,
25914834-25914946,25915359-25915491,25916213-25916351,
25916428-25916527,25916906-25916963,25917122-25917199,
25917278-25917376,25917657-25917735,25917826-25917974,
25918529-25918834,25918994-25919032
Length = 628
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 531 IIKPVRIERCIACNVLIKSDDHTC 602
I++PVR + C C+ ++ DH C
Sbjct: 406 IVRPVRSKHCSTCDRCVEQFDHHC 429
>02_01_0624 -
4681834-4682298,4684250-4684398,4684479-4684557,
4684827-4684925,4685004-4685081,4685231-4685288,
4685814-4685913,4686000-4686008,4686105-4686138,
4686729-4686911,4687099-4687126,4687268-4687380,
4688253-4688459,4689212-4689511
Length = 633
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 531 IIKPVRIERCIACNVLIKSDDHTC 602
I++PVR + C C+ ++ DH C
Sbjct: 371 IVRPVRSKHCSTCDRCVEQFDHHC 394
>01_07_0303 +
42615578-42615709,42616273-42616312,42616393-42616477,
42616634-42616813,42618274-42618354,42618890-42619011,
42619867-42620723,42621656-42621897,42622107-42622200,
42622306-42622476,42622695-42622740,42624101-42624111,
42624141-42624392
Length = 770
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = -1
Query: 358 NKLCGCDFFVEAFSDVLFILWATFITFLWGISFLLAITSVLGRYAILFFSGW 203
+ L C++F E+F++++ +++A FI F W + + I V A ++ W
Sbjct: 3 SSLFSCNWF-ESFTNLMLLVFA-FIPFCWMMMMMSLIIDVCLDSACALYNNW 52
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 561 IACNVLIKSDDHTCGISFSTF 623
IAC+ LIK + TC SF TF
Sbjct: 311 IACSFLIKCKNSTCSRSFHTF 331
>08_02_0366 - 16301133-16302592,16302702-16302750
Length = 502
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 361 ENTTLKRQYLVKTGNNPNLSARFVLKYSRFTPGLGNTSRNIIALTRKGTLFY 516
E L R + +NP+ + V Y F L T+R++ L+R+G + +
Sbjct: 358 ETWRLLRNLMALEQSNPSAAGSHVTAYCVFMSQLACTARDVELLSRRGVIVH 409
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 141 CDTCALGFKNVQALRSHQAVAHPLK 215
C +C+ F + AL+SH HP K
Sbjct: 172 CKSCSKTFNSEMALQSHSKAKHPAK 196
>03_02_0435 -
8406262-8406419,8406499-8406547,8406577-8407458,
8408976-8409127,8410346-8410616
Length = 503
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 322 FSDVLFILWATFITFLWGISFLLAITSVLGRYAILFFSGWA 200
FS +++++W + + WG + TS G A ++ SGW+
Sbjct: 310 FSLLIYVIWLIEMPWFWGHA-----TSEKGEIAQMYLSGWS 345
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 225 AYRPKTEVIAKRKLIPHKKVIKVAHKMNKTSENASTKKSQPHNLL 359
A RP+ +++A++ L K ++ HK ++ + + S++ H+ L
Sbjct: 285 AARPREDILAEKGLDWRKMETEIDHKTSRPTSSQSSRPGSAHSSL 329
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,761,806
Number of Sequences: 37544
Number of extensions: 355498
Number of successful extensions: 992
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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