Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13d24
(269 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 138 1e-33
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 138 1e-33
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 138 1e-33
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 138 1e-33
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 138 1e-33
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 51 2e-07
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 44 3e-05
AE014134-2651|AAN10921.1| 427|Drosophila melanogaster CG31823-P... 26 8.3
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 138 bits (333), Expect = 1e-33
Identities = 57/89 (64%), Positives = 72/89 (80%)
Frame = +2
Query: 2 ALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVV 181
AL+ VWA+H+SE+CRRRFYKNWY W D+LG+KSIE DF+KM+RYC V+
Sbjct: 112 ALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVI 171
Query: 182 RVIAHTQMKLLKQRQKKAHIMEIQLNGGT 268
RVIAH+Q++L+KQRQKKAH+MEIQLNGG+
Sbjct: 172 RVIAHSQIRLIKQRQKKAHVMEIQLNGGS 200
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 138 bits (333), Expect = 1e-33
Identities = 57/89 (64%), Positives = 72/89 (80%)
Frame = +2
Query: 2 ALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVV 181
AL+ VWA+H+SE+CRRRFYKNWY W D+LG+KSIE DF+KM+RYC V+
Sbjct: 101 ALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVI 160
Query: 182 RVIAHTQMKLLKQRQKKAHIMEIQLNGGT 268
RVIAH+Q++L+KQRQKKAH+MEIQLNGG+
Sbjct: 161 RVIAHSQIRLIKQRQKKAHVMEIQLNGGS 189
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 138 bits (333), Expect = 1e-33
Identities = 57/89 (64%), Positives = 72/89 (80%)
Frame = +2
Query: 2 ALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVV 181
AL+ VWA+H+SE+CRRRFYKNWY W D+LG+KSIE DF+KM+RYC V+
Sbjct: 88 ALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVI 147
Query: 182 RVIAHTQMKLLKQRQKKAHIMEIQLNGGT 268
RVIAH+Q++L+KQRQKKAH+MEIQLNGG+
Sbjct: 148 RVIAHSQIRLIKQRQKKAHVMEIQLNGGS 176
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 138 bits (333), Expect = 1e-33
Identities = 57/89 (64%), Positives = 72/89 (80%)
Frame = +2
Query: 2 ALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVV 181
AL+ VWA+H+SE+CRRRFYKNWY W D+LG+KSIE DF+KM+RYC V+
Sbjct: 88 ALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVI 147
Query: 182 RVIAHTQMKLLKQRQKKAHIMEIQLNGGT 268
RVIAH+Q++L+KQRQKKAH+MEIQLNGG+
Sbjct: 148 RVIAHSQIRLIKQRQKKAHVMEIQLNGGS 176
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 138 bits (333), Expect = 1e-33
Identities = 57/89 (64%), Positives = 72/89 (80%)
Frame = +2
Query: 2 ALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVV 181
AL+ VWA+H+SE+CRRRFYKNWY W D+LG+KSIE DF+KM+RYC V+
Sbjct: 101 ALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVI 160
Query: 182 RVIAHTQMKLLKQRQKKAHIMEIQLNGGT 268
RVIAH+Q++L+KQRQKKAH+MEIQLNGG+
Sbjct: 161 RVIAHSQIRLIKQRQKKAHVMEIQLNGGS 189
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 51.2 bits (117), Expect = 2e-07
Identities = 18/23 (78%), Positives = 22/23 (95%)
Frame = +2
Query: 2 ALLTVWAEHMSEDCRRRFYKNWY 70
AL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 101 ALVNVWAQHLSEECRRRFYKNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 44.0 bits (99), Expect = 3e-05
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +2
Query: 2 ALLTVWAEHMSEDCRRRFYKN 64
AL+ VWA+H+SE+CRRRFYKN
Sbjct: 88 ALVNVWAQHLSEECRRRFYKN 108
>AE014134-2651|AAN10921.1| 427|Drosophila melanogaster CG31823-PA
protein.
Length = 427
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -2
Query: 181 YNTTVADHLLEIFFY*FASKLILPFLTGFSESLLLAFVPVFVEATSTVFRHM 26
YNT H+ E++ Y ++ + +++L L +PV++E STVF +
Sbjct: 267 YNTQRRVHVDEVYRYGEDPQMSDFMRSNVTKALGLGNMPVWMEQNSTVFERL 318
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,392,553
Number of Sequences: 53049
Number of extensions: 173438
Number of successful extensions: 305
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 24,988,368
effective HSP length: 68
effective length of database: 21,381,036
effective search space used: 449001756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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