Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13d18
(209 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubul... 45 1e-05
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 45 1e-05
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 45 1e-05
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 45 1e-05
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 45 1e-05
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 45 1e-05
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 45 1e-05
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 45 1e-05
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 45 1e-05
AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD... 45 1e-05
AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC... 45 1e-05
AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA... 45 1e-05
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 45 1e-05
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 45 2e-05
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 45 2e-05
>X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubulin
protein.
Length = 435
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 397 EAESNMNDLVSEYQQYQEATA 417
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 416 EAESNMNDLVSEYQQYQEATA 436
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 410 EAESNMNDLVSEYQQYQEATA 430
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 410 EAESNMNDLVSEYQQYQEATA 430
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 416 EAESNMNDLVSEYQQYQEATA 436
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 410 EAESNMNDLVSEYQQYQEATA 430
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 410 EAESNMNDLVSEYQQYQEATA 430
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 410 EAESNMNDLVSEYQQYQEATA 430
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 416 EAESNMNDLVSEYQQYQEATA 436
>AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD,
isoform D protein.
Length = 375
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 338 EAESNMNDLVSEYQQYQEATA 358
>AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC,
isoform C protein.
Length = 375
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 338 EAESNMNDLVSEYQQYQEATA 358
>AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA,
isoform A protein.
Length = 456
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 419 EAESNMNDLVSEYQQYQEATA 439
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 410 EAESNMNDLVSEYQQYQEATA 430
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 44.8 bits (101), Expect = 2e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDL+SEYQQYQ+ATA
Sbjct: 410 EAESNMNDLISEYQQYQEATA 430
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 44.8 bits (101), Expect = 2e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDL+SEYQQYQ+ATA
Sbjct: 475 EAESNMNDLISEYQQYQEATA 495
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,902,737
Number of Sequences: 53049
Number of extensions: 79699
Number of successful extensions: 212
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 24,988,368
effective HSP length: 49
effective length of database: 22,388,967
effective search space used: 447779340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -