Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13d18
(209 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 45 6e-06
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 45 6e-06
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 45 8e-06
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 45 8e-06
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 43 3e-05
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 43 3e-05
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 29 0.34
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 29 0.34
Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical p... 29 0.60
Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical pr... 29 0.60
Z82086-3|CAB04997.1| 325|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z92815-5|CAH10781.1| 313|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81547-6|CAB04462.2| 313|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical p... 25 9.7
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 45.2 bits (102), Expect = 6e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 410 EAESNMNDLVSEYQQYQEATA 430
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 45.2 bits (102), Expect = 6e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+ATA
Sbjct: 410 EAESNMNDLVSEYQQYQEATA 430
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 44.8 bits (101), Expect = 8e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDL+SEYQQYQ+ATA
Sbjct: 410 EAESNMNDLISEYQQYQEATA 430
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 44.8 bits (101), Expect = 8e-06
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDL+SEYQQYQ+ATA
Sbjct: 410 EAESNMNDLISEYQQYQEATA 430
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 43.2 bits (97), Expect = 3e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+A A
Sbjct: 410 EAESNMNDLVSEYQQYQEAAA 430
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 43.2 bits (97), Expect = 3e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQDATA 64
EAESNMNDLVSEYQQYQ+A A
Sbjct: 410 EAESNMNDLVSEYQQYQEAAA 430
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 29.5 bits (63), Expect = 0.34
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQ 52
+AE+ +NDL+SE+QQY+
Sbjct: 405 DAENKVNDLISEFQQYE 421
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 29.5 bits (63), Expect = 0.34
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +2
Query: 2 EAESNMNDLVSEYQQYQ 52
+AE+ +NDL+SE+QQY+
Sbjct: 405 DAENKVNDLISEFQQYE 421
>Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 28.7 bits (61), Expect = 0.60
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 119 SVFVTCWCLVLGVMFVNLFKLLIK 190
S+F+ C C+ L MFV LFKL+ K
Sbjct: 321 SLFMGCSCVTLMEMFVFLFKLVAK 344
>Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 28.7 bits (61), Expect = 0.60
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 119 SVFVTCWCLVLGVMFVNLFKLLIK 190
S+F+ C C+ L MFV LFKL+ K
Sbjct: 321 SLFMGCSCVTLMEMFVFLFKLVAK 344
>Z82086-3|CAB04997.1| 325|Caenorhabditis elegans Hypothetical
protein ZK228.6 protein.
Length = 325
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 128 VTCWCLVLGVMFVNLFKLLIKWVFK 202
+TCWC+ L MFV LF +I +VF+
Sbjct: 193 LTCWCVGL--MFVFLFPQVIFFVFQ 215
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 177 LNKLTNITPNTKHQQVTNTE 118
+ K+ N+T N QQ+TNTE
Sbjct: 856 IQKMVNLTCNALRQQITNTE 875
>Z92815-5|CAH10781.1| 313|Caenorhabditis elegans Hypothetical
protein F53F8.2 protein.
Length = 313
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 139 PTSYKH*TGQHSLFLYLFIKFPFIISRGVLIL 44
PT YK + + ++ + FP I S +LI+
Sbjct: 106 PTRYKMLEHERYKYFFILLAFPIIYSSALLIM 137
>Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical
protein M01B2.7 protein.
Length = 302
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 139 PTSYKH*TGQHSLFLYLFIKFPFIISRGVLIL 44
PT YK + +L+L + FP I S +LI+
Sbjct: 106 PTRYKLLENERYKYLFLQMTFPVIYSSTLLIM 137
>Z81547-6|CAB04462.2| 313|Caenorhabditis elegans Hypothetical
protein F53F8.2 protein.
Length = 313
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 139 PTSYKH*TGQHSLFLYLFIKFPFIISRGVLIL 44
PT YK + + ++ + FP I S +LI+
Sbjct: 106 PTRYKMLEHERYKYFFILLAFPIIYSSALLIM 137
>Z81132-11|CAB03426.2| 302|Caenorhabditis elegans Hypothetical
protein T26E4.15 protein.
Length = 302
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 139 PTSYKH*TGQHSLFLYLFIKFPFIISRGVLIL 44
PT YK + +L+L + FP I S +LI+
Sbjct: 106 PTRYKLLENERYKYLFLQMTFPVIYSSTLLIM 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,694,328
Number of Sequences: 27780
Number of extensions: 44392
Number of successful extensions: 142
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 12,740,198
effective HSP length: 49
effective length of database: 11,378,978
effective search space used: 227579560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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