Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13d18
         (209 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   0.30 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   0.30 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   0.30 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   4.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    19   4.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   4.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.30
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 107 MLSCSVFVTCWCLVLGVMFVNLFKLLI 187
           ML C++    W L + V+FVN F  +I
Sbjct: 2   MLRCNI----WTLAVNVLFVNSFLFVI 24


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.30
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 107 MLSCSVFVTCWCLVLGVMFVNLFKLLI 187
           ML C++    W L + V+FVN F  +I
Sbjct: 2   MLRCNI----WTLAVNVLFVNSFLFVI 24


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.30
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 107 MLSCSVFVTCWCLVLGVMFVNLFKLLI 187
           ML C++    W L + V+FVN F  +I
Sbjct: 2   MLRCNI----WTLAVNVLFVNSFLFVI 24


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 189 FIKSLNKLTNITPNTKHQQVTNTEQDNIH 103
           F+ SL  L    PN    +   T Q NI+
Sbjct: 11  FLASLCLLVQAVPNKVADKTYVTRQKNIY 39


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +2

Query: 140 CLVLGVMFVNLFKLL 184
           C+++  ++ N+FK L
Sbjct: 356 CIIMVFLYYNIFKAL 370


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 189 FIKSLNKLTNITPNTKHQQVTNTEQDNIH 103
           F+ SL  L    PN    +   T Q NI+
Sbjct: 11  FLASLCLLVQAVPNKVADKTYVTRQKNIY 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,259
Number of Sequences: 438
Number of extensions: 500
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3039192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)