BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13d13
(534 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 23 2.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.0
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 2.0
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 2.6
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 3.4
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 3.4
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 3.4
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 3.4
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 3.4
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 3.4
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 3.4
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 22 3.4
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 6.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 6.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 7.9
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 7.9
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 23.0 bits (47), Expect = 2.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ PL+ ++PP+ Y PL
Sbjct: 146 RHIGPLTPFPRFIPPNAYRFRPPL 169
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 2.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ PL+ ++PP+ Y PL
Sbjct: 387 RHIGPLTPFPRFIPPNAYRFRPPL 410
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.0 bits (47), Expect = 2.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 268 VGFRDLCDMFDYNCI 312
+G RDLCD+ YN +
Sbjct: 304 IGSRDLCDVQRYNLL 318
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 422 FFLNIFSYVYLLLTRV 469
FF+ IF+Y+ +L+T V
Sbjct: 413 FFIVIFTYIIILITLV 428
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y L PL
Sbjct: 142 RHIGPSTPFPRFIPPNAYRLRPPL 165
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y L PL
Sbjct: 142 RHIGPSTPFPRFIPPNAYRLRPPL 165
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y L PL
Sbjct: 142 RHIGPSTPFPRFIPPNAYRLRPPL 165
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y L PL
Sbjct: 142 RHIGPSTPFPRFIPPNAYRLRPPL 165
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y L PL
Sbjct: 142 RHIGPSTLFPRFIPPNAYRLRPPL 165
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y L PL
Sbjct: 142 RHIGPSTPFPRFIPPNAYRLRPPL 165
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 3.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -3
Query: 310 CSYNRTCRIDL*SRRHLQ 257
C Y C ID+ RR Q
Sbjct: 223 CKYGNNCEIDMYMRRKCQ 240
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 22.2 bits (45), Expect = 3.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -3
Query: 310 CSYNRTCRIDL*SRRHLQ 257
C Y C ID+ RR Q
Sbjct: 20 CKYGNNCEIDMYMRRKCQ 37
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 222 PRPRPDLRYQSRWRCR 269
P P PD+ Y+ R R R
Sbjct: 197 PEPYPDITYEIRLRRR 212
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P ++ ++PP+ Y PL
Sbjct: 376 RHIGPSTSFPRFIPPNAYRFRPPL 399
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y PL
Sbjct: 151 RHIGPSTPFPQFIPPNAYKFRPPL 174
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y PL
Sbjct: 151 RHIGPSTPFPRFIPPNAYKFRPPL 174
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 210 RHVAPLSTHFFYLPPHRYVLIIPL 139
RH+ P + ++PP+ Y PL
Sbjct: 154 RHIGPSTPFPRFIPPNAYKFRPPL 177
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,684
Number of Sequences: 438
Number of extensions: 2846
Number of successful extensions: 36
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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