Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13d12
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0783 - 21166491-21166892,21167139-21167251,21168127-211682... 89 3e-18
03_03_0132 + 14711645-14711839,14712641-14712970,14713689-147137... 85 6e-17
01_05_0726 - 24630080-24630778,24630899-24631011,24631088-246311... 84 1e-16
05_04_0441 - 21271106-21271495,21271608-21271751,21272639-212727... 64 7e-11
08_02_0636 + 19567654-19568859 63 2e-10
11_06_0655 - 25923171-25923185,25923208-25923432,25923865-259243... 53 2e-07
02_05_1022 + 33570664-33570976,33572206-33573440,33573873-335740... 53 2e-07
01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480 52 4e-07
12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497 48 6e-06
02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112 45 4e-05
08_02_0191 + 14041201-14043894,14044354-14044632 45 6e-05
06_01_0410 + 2928382-2930973 44 7e-05
12_01_0655 + 5546293-5546478,5546760-5546877,5550697-5550776,555... 44 1e-04
05_03_0179 - 9257066-9258946 41 7e-04
01_06_1468 + 37574124-37574180,37574275-37574346,37574437-375745... 41 0.001
07_01_0605 + 4503507-4503605,4504118-4504249,4504745-4504881,450... 37 0.015
04_04_1056 - 30447791-30447850,30448020-30448085,30448299-304485... 32 0.43
11_01_0268 - 2029007-2029464,2029521-2029615,2030815-2031077,203... 31 0.56
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 31 0.98
11_06_0232 + 21559467-21559532,21559586-21560200 31 0.98
02_01_0500 - 3623837-3624019,3624591-3624778,3625209-3626147,362... 31 0.98
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 30 1.3
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 30 1.7
05_03_0266 + 11303932-11304072,11304150-11304185,11304640-113049... 29 2.3
01_06_1096 + 34502668-34503036,34504294-34505317,34505388-34505656 29 4.0
07_01_0383 - 2856777-2858042,2858238-2858270,2858607-2858742,286... 28 5.2
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 28 5.2
06_03_1041 - 27086661-27086981,27087089-27087295,27087398-270876... 28 6.9
04_01_0555 + 7152196-7153065,7154805-7154960,7155058-7155130,715... 28 6.9
09_02_0584 - 10930515-10930880 27 9.2
06_01_0525 - 3800578-3801018,3801395-3801504,3801608-3801683,380... 27 9.2
02_05_0440 - 29035974-29036356,29037977-29038133,29038260-290388... 27 9.2
02_01_0554 + 4083020-4083854,4083877-4083906,4084843-4084911,408... 27 9.2
>08_02_0783 -
21166491-21166892,21167139-21167251,21168127-21168208,
21168298-21168416,21168471-21168528,21168954-21169016,
21169641-21169850,21171549-21171731
Length = 409
Score = 88.6 bits (210), Expect = 3e-18
Identities = 46/125 (36%), Positives = 75/125 (60%), Gaps = 2/125 (1%)
Frame = +2
Query: 209 KLPARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKN-GVQAMVEFESVESA 385
K+ +++LL +I N Y +TVDV+HT+ + G VQ+I +F+KN G+QA++++ + +A
Sbjct: 184 KIKEPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGMQALIQYPDITTA 243
Query: 386 TRAKEALHGCDIY-SGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSAPLLQS 562
AK+AL G IY G C L + +++ LNV +D+ S DYT+S D ++A
Sbjct: 244 AVAKQALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTVSSDPSAQMQAAAQAPG 303
Query: 563 PQYTG 577
P G
Sbjct: 304 PSTPG 308
>03_03_0132 +
14711645-14711839,14712641-14712970,14713689-14713751,
14713833-14713906,14714004-14714099,14714705-14714759,
14714867-14714971,14715054-14715135,14715450-14715562,
14715717-14716118
Length = 504
Score = 84.6 bits (200), Expect = 6e-17
Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Frame = +2
Query: 206 RKLPARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKN-GVQAMVEFESVES 382
RK+ A N +LL +I N Y +TVDV+HT+ + G VQ+I +F+KN G QA++++ V +
Sbjct: 279 RKVEAEGN-VLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTT 337
Query: 383 ATRAKEALHGCDIY-SGCCTLKIEFAKPEKLNVFKNDQESWDYTLSED-LQPVQRSAPLL 556
A+ AKEAL G IY G C L + +++ LNV + +S DYT+ + +Q V + +
Sbjct: 338 ASVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHSDKSRDYTIPQGAMQAVPQPPGVP 397
Query: 557 QSPQYTGGRPQ 589
+ G PQ
Sbjct: 398 TTSAGWQGNPQ 408
Score = 54.4 bits (125), Expect = 7e-08
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Frame = +2
Query: 230 HILLYTIIN-PAYPITVDVIHTISTPHGQVQRIVVFKK-NGVQAMVEFESVESATRAKEA 403
++LL TI A +T+DVIH + + G V +I F+K G QA++++ +A+ A+EA
Sbjct: 154 NVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASAAREA 213
Query: 404 LHGCDI-------YSGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSA 547
L G I + C L+I F+ + LN+ S DYT PV SA
Sbjct: 214 LDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYT--NPYLPVNSSA 266
>01_05_0726 -
24630080-24630778,24630899-24631011,24631088-24631169,
24631248-24631337,24631412-24631469,24631661-24631756,
24631835-24631908,24632006-24632068,24634111-24634320,
24634869-24635048
Length = 554
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Frame = +2
Query: 227 NHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKN-GVQAMVEFESVESATRAKEA 403
+++LL ++ N Y +T+DV+H + + G VQ+I +F+KN G QA++++ +++A AKEA
Sbjct: 236 SNVLLASVENMQYVVTIDVLHEVFSAFGFVQKIAIFEKNSGFQALIQYPDIQTAVAAKEA 295
Query: 404 LHGCDIY-SGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSAPLLQSPQYTGG 580
L G IY G C L + F++ LNV N++ DYT + + L P Y+G
Sbjct: 296 LEGHSIYEGGYCKLHLTFSRHTDLNVKVNNERGRDYTGGNTAPTSNQPSILGPQPVYSGA 355
Query: 581 RPQPYNMDYGSGGPP 625
+ G+ PP
Sbjct: 356 YNNAPSSATGAVVPP 370
Score = 52.8 bits (121), Expect = 2e-07
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Frame = +2
Query: 269 ITVDVIHTISTPHGQVQRIVVFKK-NGVQAMVEFESVESATRAKEALHGCDIYSGC---- 433
+++DV+H + + G VQ+I F+K +G QA+++F E+A+ AK AL G I S
Sbjct: 123 VSIDVLHLVFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDGRCIPSYLLPEL 182
Query: 434 ---CTLKIEFAKPEKLNVFKNDQESWDYT 511
CTL+I ++ LNV S DYT
Sbjct: 183 DVPCTLRINYSAHTVLNVKFQSHRSRDYT 211
>05_04_0441 -
21271106-21271495,21271608-21271751,21272639-21272746,
21272846-21272859,21273103-21273154,21273592-21273656,
21274447-21274579,21275260-21275341,21275639-21275715,
21276037-21276093
Length = 373
Score = 64.5 bits (150), Expect = 7e-11
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +2
Query: 218 ARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKN-GVQAMVEFESVESATRA 394
+ PN ILL TI + YPITV+V+H + +G V++IV F+K+ G QA+++++S++ A A
Sbjct: 74 SEPNRILLVTIHHMMYPITVEVLHQVFKAYGYVEKIVTFQKSAGFQALIQYQSLQEAMDA 133
Query: 395 KEALHG 412
ALHG
Sbjct: 134 FGALHG 139
>08_02_0636 + 19567654-19568859
Length = 401
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = +2
Query: 233 ILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKNGVQ--AMVEFESVESATRAKEAL 406
+L T+ + YP+T +V+ + +P+G + + V+ + +Q A + F + ATRA+EAL
Sbjct: 84 VLHVTMSHVLYPVTAEVLLQVFSPYG-AEEVRVYNQGTIQVEAFILFRLCQDATRAREAL 142
Query: 407 HGCDIYSGCCTLKIEF 454
HGC IY+GCC L +++
Sbjct: 143 HGCCIYNGCCFLDVKY 158
>11_06_0655 -
25923171-25923185,25923208-25923432,25923865-25924324,
25924330-25924985
Length = 451
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = +2
Query: 233 ILLYTIINPAYPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALH 409
+L T+ YP+T +V+H + +G V +++ V+A+V F S A RA+ A H
Sbjct: 42 VLRVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 101
Query: 410 GCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSA-PLLQS 562
G DIY G C L + + + +F D + +T + P +A P+ +S
Sbjct: 102 GRDIYDGGCLLDV-----QHVQMFPGDGATATHTTCSTMVPSSATARPVAKS 148
>02_05_1022 +
33570664-33570976,33572206-33573440,33573873-33574013,
33574242-33574796,33574914-33575015
Length = 781
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +2
Query: 233 ILLYTIINPAYPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALH 409
+L T+ YP+T +V+H + +G V +++ V+A+V F S A RA+ A H
Sbjct: 157 VLRVTVSQIIYPVTSEVLHQVYNTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSATH 216
Query: 410 GCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSA-PLLQSPQYTGGRP 586
G DIY G C + + + + +F D + +T + P +A P +S T R
Sbjct: 217 GRDIYDGGCLMDV-----QHVQMFPGDGATTTHTTCLTMVPSSATARPAAKSTAATPERV 271
Query: 587 QP 592
P
Sbjct: 272 FP 273
>01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480
Length = 623
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 263 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 439
YP+T +V+H + +G V +++ GV+A V F S A RA+ +G +IY GCC
Sbjct: 69 YPVTSEVLHQVYNTYGAVAVQVLTTSPLGVEAFVWFRSSCDAERARSVTNGRNIYDGCCL 128
Query: 440 LKIEFAKP 463
L ++ P
Sbjct: 129 LDVQHVHP 136
>12_01_0744 - 6688631-6688660,6689032-6690603,6690697-6691497
Length = 800
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Frame = +2
Query: 233 ILLYTIINPAYPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALH 409
+L T+ YP+T +V+H + +G V +++ V+A+V F S A RA+ H
Sbjct: 63 VLCVTVSQIIYPVTSEVLHQVYDTYGAVAVQVLAVSTWQVKALVSFMSSHDAERARSTTH 122
Query: 410 GCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSA-PLLQS 562
G DIY C L + + + +F D + +T + P +A P+ +S
Sbjct: 123 GHDIYDEGCLLDM-----QHVQMFPGDGATATHTTCSTMVPSSATARPVAKS 169
>02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112
Length = 747
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 263 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 439
YP+T +V+H + +G V +++ GV+A+V F S A RA+ + +IY GCC
Sbjct: 76 YPVTGEVLHQVYNDYGAVAVQVLATSCWGVEALVWFRSSCDAERARSDTNERNIYDGCCL 135
Query: 440 LKIE 451
L ++
Sbjct: 136 LDVQ 139
>08_02_0191 + 14041201-14043894,14044354-14044632
Length = 990
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 263 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 439
YP++ +V+H + P+G V +++V V+A+V F + A A+ LHG +IY G C
Sbjct: 75 YPVSTNVMHQVFNPYGAVAVQMLVVDAWRVEAIVWFRTTCDAEWAQAELHGRNIYDGGCV 134
Query: 440 LKIE 451
L ++
Sbjct: 135 LDVQ 138
>06_01_0410 + 2928382-2930973
Length = 863
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 263 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 439
YP++ +V+H + P+G V +++ V+A+V F + A A++ LHG +IY G C
Sbjct: 78 YPVSTNVMHQVFNPYGAVAVQMLAVDAWRVEAIVWFRTTCDAEWAQDELHGRNIYDGGCV 137
Query: 440 LKIE 451
L ++
Sbjct: 138 LDVQ 141
>12_01_0655 +
5546293-5546478,5546760-5546877,5550697-5550776,
5551329-5552345,5552523-5553344,5553528-5553800
Length = 831
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 263 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 439
YP+T +V+H + +G V +++ GV+A+V F S RA+ + +IY GCC
Sbjct: 203 YPVTSEVLHQVYNGYGAVAVQVLATSCWGVEALVWFRSSCDTERARSDTNEHNIYDGCCL 262
Query: 440 LKIE 451
L ++
Sbjct: 263 LDVQ 266
>05_03_0179 - 9257066-9258946
Length = 626
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 263 YPITVDVIHTISTPHGQVQ-RIVVFKKNGVQAMVEFESVESATRAKEALHGCDIYSGCCT 439
YP+T V++ + +G + I+V V+ +V F + A +A+ A HG +IY G C
Sbjct: 78 YPVTNKVLYQVYDIYGAEELHILVVDAWRVEVLVWFRARGDAKKARGATHGRNIYDGGCL 137
Query: 440 LKIEFAKP 463
L+ + A+P
Sbjct: 138 LEAQHAQP 145
>01_06_1468 +
37574124-37574180,37574275-37574346,37574437-37574513,
37574897-37574978,37576005-37576069,37576313-37576354,
37576452-37576503,37576631-37576679,37576784-37576797,
37576942-37577049,37577129-37577272,37577421-37577810
Length = 383
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 269 ITVDVIHTISTPHGQVQRIVVFKKNG-VQAMVEFESVESATRAKEALH 409
IT D IH++ HG + +F+ NG QA+V FESVE AT A H
Sbjct: 317 ITEDTIHSLVGEHGTIANSRLFETNGKTQALVLFESVEEATEALVEKH 364
>07_01_0605 +
4503507-4503605,4504118-4504249,4504745-4504881,
4505024-4505156
Length = 166
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 344 GVQAMVEFESVESATRAKEALHGCDIYSGCCTLKIE 451
GV+A V F S A RA+ +G +IY GCC L ++
Sbjct: 41 GVEASVWFRSTCDAERARSITNGRNIYDGCCLLDVQ 76
>04_04_1056 -
30447791-30447850,30448020-30448085,30448299-30448583,
30448744-30448869,30449068-30449154,30449273-30449695
Length = 348
Score = 31.9 bits (69), Expect = 0.43
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +2
Query: 194 PCRKRKLPARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKNGVQAMVEFES 373
P + PA P+ L PA +T D I G+V + +GV+ +V F
Sbjct: 14 PLGEGAAPA-PSAALYVANCGPAVGLTHDDIRAAFAAFGEVAGVHGADGSGVRVIVRFRE 72
Query: 374 VESATRAKEALHG--CDIYSGCCTLKIEFAKPEK 469
+A A ALHG C +G L I ++ P K
Sbjct: 73 PAAAEAAMSALHGRPCAGLAG-RVLHIRYSVPAK 105
>11_01_0268 -
2029007-2029464,2029521-2029615,2030815-2031077,
2031154-2031279,2031404-2032996
Length = 844
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 208 KAAGAAEPHTALHHHQSGISHHCGRNTHNKHPARTSAKDRRLQEEWRAGDG 360
+ G + H + G GR+ + AR + RRL+E RAGDG
Sbjct: 179 RCVGQRKDAAPTHQLRIGAGRDQGRSVRLRRDAREDGRGRRLEEGNRAGDG 229
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 30.7 bits (66), Expect = 0.98
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 263 YPITVDVIHTISTPHGQVQRIVVFKKNGVQAMVEFESVESATRAKEALHG 412
Y V V+ P G V ++ +Q +EF VES+T+AK +HG
Sbjct: 499 YGNLVKVVIPRPDPSGAPVAGVGRHESALQVFLEFADVESSTKAKNGMHG 548
>11_06_0232 + 21559467-21559532,21559586-21560200
Length = 226
Score = 30.7 bits (66), Expect = 0.98
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 309 DKCKGSSSSRRMACRRWLSLKAWNQRREQKKHYTAATYTRDAAHSKLNSLSPKN*TCSKT 488
D +G RR+A RR L+ + RE++K A D H+ S +
Sbjct: 72 DVGEGGPQRRRIASRRHGELRVEARAREREKSRGGAEEEVDG-HTCCKSAQAASVHPGGA 130
Query: 489 TRRA--GTTHYPRTCSRYRGAP 548
R+A GTT PR +R RGAP
Sbjct: 131 KRQAAAGTTVTPRPRARTRGAP 152
>02_01_0500 -
3623837-3624019,3624591-3624778,3625209-3626147,
3626311-3626479,3626701-3626871,3626948-3627016,
3627094-3627201,3627844-3627997,3628659-3628738,
3628822-3628914,3628951-3629073,3629165-3629915,
3630123-3630163,3630338-3630385
Length = 1038
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 353 AMVEFESVESATRAKEALHGCDIYSGCCTLKIEFAK 460
A + F SVE AT+A EA +G + L++ +AK
Sbjct: 483 AFIHFHSVEEATKALEATNGITLEKNGQVLRVTYAK 518
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 254 NPAYPITV-DVIHTISTPHGQVQRIVVFKKNGVQAMVEFESVESATRAKEALHG 412
+P + + + D + + GQV+ I V K + F+S+ +A A++ALHG
Sbjct: 489 DPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSGFVYLRFDSITAAMSAQKALHG 542
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 254 NPAYPITV-DVIHTISTPHGQVQRIVVFKKNGVQAMVEFESVESATRAKEALHG 412
+P + + + D + + G V I V K + F+SV +AT A+ ALHG
Sbjct: 472 DPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVYLHFDSVAAATAAQRALHG 525
>05_03_0266 +
11303932-11304072,11304150-11304185,11304640-11304903,
11305157-11305524,11305603-11305773,11305853-11306141,
11306373-11306393
Length = 429
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +2
Query: 395 KEALHGCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQP---VQRSAPLLQSP 565
K +HG + + C ++++ KPE +F + D LS P +Q L++
Sbjct: 89 KTTVHGAQLRANCAKVQVDSVKPE-FELFLLKYPANDKVLSLGNAPGTFIQWPKDLIEIK 147
Query: 566 QYTGGRPQ-----PYNMDYGSG 616
+ GG+ Q P N+D G G
Sbjct: 148 RGRGGKVQASLLAPRNLDLGKG 169
>01_06_1096 + 34502668-34503036,34504294-34505317,34505388-34505656
Length = 553
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 482 KNDQESW-DYTLSEDLQPVQRSAPLLQSPQYT 574
++D SW YT++ LQP + P LQSP T
Sbjct: 328 ESDPNSWLKYTVAPALQPTELVDPYLQSPAAT 359
>07_01_0383 -
2856777-2858042,2858238-2858270,2858607-2858742,
2860778-2860890
Length = 515
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 135 VQVATWMLKGATATTTWPASHAANESCRRGRTTYCSTP 248
V +A +L ATA T P+ H RRGR ++ S P
Sbjct: 10 VVMALLLLHQATAVTLLPSVHEPPPWSRRGRRSFSSPP 47
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 178 LHGRRAMPQTKAAGAAEPHTALHHHQS-GISHHCGRNTH 291
L RR++P A H HHH G SHH G H
Sbjct: 57 LLARRSLPFAPRAHGDHHHGHHHHHHGHGHSHHHGPEVH 95
>06_03_1041 -
27086661-27086981,27087089-27087295,27087398-27087675,
27088360-27088471
Length = 305
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 149 LDVERSNGNNYMAGEPCRKRKLPARPNHILLYTIINPAYPITVDVIHTISTPHGQV 316
LD ++ G+PC + P +H ++I+ ITVDV T+ GQ+
Sbjct: 14 LDPAHRADTAWLFGQPCLIGQCPKEEDHRQNMSLISKLRLITVDVTGTLLAYKGQL 69
>04_01_0555 +
7152196-7153065,7154805-7154960,7155058-7155130,
7156261-7156367
Length = 401
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 362 EFESVESATRAKEALHGC-DIYSGCCTLKIE 451
EF +ESAT A+HGC C TL I+
Sbjct: 192 EFNKIESATLKSLAIHGCRSCLLECTTLAIK 222
>09_02_0584 - 10930515-10930880
Length = 121
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 265 SHHCGRNTHNKHPAR-TSAKDRRLQEEWRAG 354
SH C + PA T+A R QE+WR G
Sbjct: 90 SHGCSSGSEEAAPATGTTAAATRAQEQWRLG 120
>06_01_0525 -
3800578-3801018,3801395-3801504,3801608-3801683,
3801757-3801909,3802088-3802159,3802242-3802322,
3802936-3803001,3803117-3803182,3803277-3803327,
3803429-3803512,3803988-3804088,3804188-3804329,
3804820-3804917,3805194-3805263,3805409-3805477
Length = 559
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 160 KEQRQQLHGRRAMPQTKAAGAAEPHTALHHHQSGISH 270
++Q L + M AA AA P HHHQ H
Sbjct: 486 QQQAFMLQQQMMMAAAAAAAAAPPPQVFHHHQQQQQH 522
>02_05_0440 -
29035974-29036356,29037977-29038133,29038260-29038824,
29038866-29039191
Length = 476
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 213 CRRGRTTYCSTPSS--IRHIPSLWT*YTQ*APRTDKCKGSSSSRRMACRRWL 362
C G +T C TP S R I + + + PR GSSSS A RW+
Sbjct: 61 CPTGPSTACQTPPSGGCRSISTATS--SCRTPRAPAASGSSSSAATARTRWM 110
>02_01_0554 +
4083020-4083854,4083877-4083906,4084843-4084911,
4085170-4085445,4085601-4085720,4086037-4086044
Length = 445
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 517 RGLAAGTEERPASAVTAVHRWTTPALQYGLWKRW 618
RG AA R +A RW A +YG+ +RW
Sbjct: 112 RGRAARGRGRGRAASECRRRWEALAAEYGVVRRW 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,197,936
Number of Sequences: 37544
Number of extensions: 502440
Number of successful extensions: 1856
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1836
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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