Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13d12
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical p... 118 3e-27
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 116 2e-26
Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical pr... 87 7e-18
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 87 7e-18
Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 2.0
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 2.0
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 29 2.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF022970-4|AAB69898.1| 336|Caenorhabditis elegans Hypothetical ... 29 2.7
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 29 3.6
Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z74040-2|CAA98513.1| 287|Caenorhabditis elegans Hypothetical pr... 28 6.2
AJ561210-1|CAD99212.1| 151|Caenorhabditis elegans NAS-20 protei... 28 6.2
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 27 8.2
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 27 8.2
>U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical
protein C44B7.2b protein.
Length = 339
Score = 118 bits (284), Expect = 3e-27
Identities = 59/135 (43%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Frame = +2
Query: 218 ARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKK-NGVQAMVEFESVESATRA 394
A PN +L+ T++N YPI DVI+ IS G+V R+ V K VQA+VEFES+E A A
Sbjct: 117 ATPNKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAA 176
Query: 395 KEALHGCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYTLSEDLQPVQRSAPLLQSPQYT 574
K A++G DIYSGCCTLK+EFAKP+++ V + D++ D+TL ++ +P + Y
Sbjct: 177 KHAMNGADIYSGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDNRRPYEDDRNHYDRHDYQ 236
Query: 575 GGRPQPYNMDYGSGG 619
P Y GG
Sbjct: 237 A--PSSYGYSSRGGG 249
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 116 bits (278), Expect = 2e-26
Identities = 59/126 (46%), Positives = 80/126 (63%), Gaps = 3/126 (2%)
Frame = +2
Query: 218 ARPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKK-NGVQAMVEFESVESATRA 394
A PN +L+ T++N YPI DVI+ IS G+V R+ V K VQA+VEFES+E A A
Sbjct: 117 ATPNKVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAA 176
Query: 395 KEALHGCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYTL--SEDLQPVQRSAPLLQSPQ 568
K A++G DIYSGCCTLK+EFAKP+++ V + D++ D+TL +E Q R + P
Sbjct: 177 KHAMNGADIYSGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDNESFQDTGRKTLIPAKPD 236
Query: 569 YTGGRP 586
RP
Sbjct: 237 DHYRRP 242
>Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical
protein D2089.4b protein.
Length = 453
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/98 (40%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +2
Query: 221 RPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKNGV-QAMVEFESVESATRAK 397
+PN +L I N +P+++DV++ + T +G+V RI+ F KN QA+V+ SA AK
Sbjct: 65 QPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAK 124
Query: 398 EALHGCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYT 511
+ L ++Y+GCCTL+I+++K LNV N+ +S DYT
Sbjct: 125 QGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYT 162
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/98 (40%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +2
Query: 221 RPNHILLYTIINPAYPITVDVIHTISTPHGQVQRIVVFKKNGV-QAMVEFESVESATRAK 397
+PN +L I N +P+++DV++ + T +G+V RI+ F KN QA+V+ SA AK
Sbjct: 227 QPNSVLRTIIENMMFPVSLDVLYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAK 286
Query: 398 EALHGCDIYSGCCTLKIEFAKPEKLNVFKNDQESWDYT 511
+ L ++Y+GCCTL+I+++K LNV N+ +S DYT
Sbjct: 287 QGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYT 324
>Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical
protein R03D7.2 protein.
Length = 542
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 199 PQTKAAGAA----EPHTALHHHQSGISHHCGRNTHNKHPARTSAKDRRLQEEWR 348
P +K GAA PH HH S++ + H++ R ++ +R Q +W+
Sbjct: 8 PSSKIDGAAPRSRSPHRRQPHHSRSSSNNISSSLHSRLRRRRRSRSQRKQLQWQ 61
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 530 PVQRSAPLLQSPQYTGGRPQPYNMDYGSGGPP 625
PVQ + +Q+PQ PQ Y G GGPP
Sbjct: 603 PVQAAPAPVQAPQAPQAPPQAYQGYGGPGGPP 634
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 530 PVQRSAPLLQSPQYTGGRPQPYNMDYGSGGPP 625
PVQ + +Q+PQ PQ Y G GGPP
Sbjct: 603 PVQAAPAPVQAPQAPQAPPQAYQGYGGPGGPP 634
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 163 EQRQQLHGRRAMPQTKAAGAAEPHTALHHHQSGISHHCGRNTHNKHPA-RTSAKDR 327
++R + G+ P +A + H HHH +H+ RN H H R +DR
Sbjct: 48 DRRHRSPGKHIAP-ARAHNRGQHHNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDR 102
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 163 EQRQQLHGRRAMPQTKAAGAAEPHTALHHHQSGISHHCGRNTHNKHPA-RTSAKDR 327
++R + G+ P +A + H HHH +H+ RN H H R +DR
Sbjct: 892 DRRHRSPGKHIAP-ARAHNRGQHHNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDR 946
>AF022970-4|AAB69898.1| 336|Caenorhabditis elegans Hypothetical
protein F13A2.3 protein.
Length = 336
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +1
Query: 193 AMP--QTKAAGAAEPHTALHHHQSGISHHCGRNTHNKHPARTSAKDRRLQEEWR 348
AMP Q A +PH HH+ S H P +T + R ++ WR
Sbjct: 200 AMPIKQKSEANGTKPHNNTTHHRQFDSSRRREERHQAAPYQTRSAYGRYRDSWR 253
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = -1
Query: 544 APLYRLQVLG*CVVPALLVVFEHVQFFGLSEFNFECAASRVYVAAV*CFFCSRR*FHAFK 365
A L++ G VVP L F + GL+ S +YV A+ F +RR +HAF+
Sbjct: 1113 ACLFQETFFGSDVVPTLSYWF-YGTITGLTGIGLVIVMSIIYVFALPKF--TRRAYHAFR 1169
Query: 364 LNHRLH 347
L H L+
Sbjct: 1170 LTHLLN 1175
>Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical
protein T11F9.3 protein.
Length = 379
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 20 HPRRRVCRLQFYQNGFRCD*CFVLLCMMAYNG 115
HPR+ C+ YQN C+ C LC +NG
Sbjct: 212 HPRKLDCKNGGYQNPANCEEC---LCTDGFNG 240
>Z74040-2|CAA98513.1| 287|Caenorhabditis elegans Hypothetical
protein K10D6.2b protein.
Length = 287
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +2
Query: 467 KLNVFKNDQESWDYTLSEDLQPVQRSAPLLQ----SPQYTGGRPQP 592
K N+F Q++ TLS + P +R PLL S Q G RP P
Sbjct: 225 KENLFTWQQQTQPVTLSVNELPYRREEPLLHDKFVSSQQAGYRPNP 270
>AJ561210-1|CAD99212.1| 151|Caenorhabditis elegans NAS-20 protein
protein.
Length = 151
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 20 HPRRRVCRLQFYQNGFRCD*CFVLLCMMAYNG 115
HPR+ C+ YQN C+ C LC +NG
Sbjct: 55 HPRKLDCKNGGYQNPANCEEC---LCTDGFNG 83
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 308 GQVQRIVVFKKNGVQAMVEFESVESATRAKEALHGCDI 421
G + + FK G A V+FE+ ESA RA ++ DI
Sbjct: 279 GPINEVRTFKIQGY-AFVKFETKESAARAIVQMNNADI 315
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 163 EQRQQLHGRRAMPQTKAAGAAEPHTALHHH 252
+Q+Q L MP + GAA P T HHH
Sbjct: 577 QQQQTLTNSMYMPIVTSTGAAVPLTNGHHH 606
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,954,888
Number of Sequences: 27780
Number of extensions: 395430
Number of successful extensions: 1533
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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