Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13d11
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 215 9e-57
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 208 1e-54
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 205 1e-53
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 205 1e-53
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 201 2e-52
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 200 4e-52
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 146 9e-36
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 146 9e-36
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 95 2e-20
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 95 2e-20
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 95 2e-20
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 93 8e-20
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 93 8e-20
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 93 8e-20
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 93 1e-19
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 93 1e-19
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 93 1e-19
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 91 3e-19
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 91 5e-19
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 90 6e-19
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 90 6e-19
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 90 6e-19
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 85 2e-17
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 85 2e-17
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 84 4e-17
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 69 1e-12
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 33 0.073
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 33 0.073
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 28 2.7
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 28 2.7
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 28 2.7
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 28 2.7
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 27 4.8
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 27 4.8
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 4.8
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 27 4.8
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 6.3
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 27 8.3
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 215 bits (526), Expect = 9e-57
Identities = 96/102 (94%), Positives = 100/102 (98%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PRA +VDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWA
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWA 102
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 208 bits (509), Expect = 1e-54
Identities = 92/102 (90%), Positives = 97/102 (95%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MREIVH+QAGQCGNQIGAKFWEVISDEHGI G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWA
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWA 102
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 205 bits (500), Expect = 1e-53
Identities = 91/102 (89%), Positives = 96/102 (94%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWA
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWA 102
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 205 bits (500), Expect = 1e-53
Identities = 91/102 (89%), Positives = 96/102 (94%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWA
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWA 102
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 201 bits (491), Expect = 2e-52
Identities = 88/102 (86%), Positives = 96/102 (94%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWA
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWA 102
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 200 bits (488), Expect = 4e-52
Identities = 87/102 (85%), Positives = 96/102 (94%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWA
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWA 102
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 146 bits (353), Expect = 9e-36
Identities = 61/102 (59%), Positives = 80/102 (78%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PRA++VDL+P +++ VRS +G++F P+N V G+SGAGNNW+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWS 102
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 146 bits (353), Expect = 9e-36
Identities = 61/102 (59%), Positives = 80/102 (78%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PRA++VDL+P +++ VRS +G++F P+N V G+SGAGNNW+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWS 102
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 95.1 bits (226), Expect = 2e-20
Identities = 39/102 (38%), Positives = 59/102 (57%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MRE++ I GQ G QIG WE+ EHGI G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYA 102
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 95.1 bits (226), Expect = 2e-20
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE--RINVYYNEASGGK 316
MREIV I GQ G QIG WE+ EHGI G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 317 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
+VPRA+ VDLEP +D VR+G + ++F P+ + G+ A NN+A
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYA 104
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 95.1 bits (226), Expect = 2e-20
Identities = 39/102 (38%), Positives = 59/102 (57%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MRE++ I GQ G QIG WE+ EHGI G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYA 102
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 93.1 bits (221), Expect = 8e-20
Identities = 39/102 (38%), Positives = 60/102 (58%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MRE++ I GQ G QIG WE+ EHGI G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYA 102
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 93.1 bits (221), Expect = 8e-20
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Frame = +2
Query: 146 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQLERINVYYNEASGGKYV 322
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PRA+ VDLEP +D +R+G +G +F PD + G+ A NN+A
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYA 107
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 93.1 bits (221), Expect = 8e-20
Identities = 39/102 (38%), Positives = 60/102 (58%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MRE++ I GQ G QIG WE+ EHGI G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYA 102
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 92.7 bits (220), Expect = 1e-19
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 316
MRE++ I GQ G QIG WE+ EHGI G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 317 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
+VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYA 104
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 92.7 bits (220), Expect = 1e-19
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 316
MRE++ I GQ G QIG WE+ EHGI G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 317 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
+VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYA 104
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 92.7 bits (220), Expect = 1e-19
Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 316
MRE++ I GQ G QIG WE+ EHGI G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 317 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
+VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYA 104
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 91.5 bits (217), Expect = 3e-19
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +2
Query: 146 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS--DLQLERINVYYNEASGGKY 319
RE++ I GQ G QIG WE+ EHGI G + D D + E IN ++ E +GGK+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 320 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
VPR + VDLEP +D VR+G + +F P+ + G+ A N +A
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYA 110
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 90.6 bits (215), Expect = 5e-19
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Frame = +2
Query: 146 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGKY 319
RE++ I GQ G QIG WE+ EHGI G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 320 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYA 103
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 90.2 bits (214), Expect = 6e-19
Identities = 37/102 (36%), Positives = 59/102 (57%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MRE++ I GQ G QIG WE+ EHGI G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYA 102
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 90.2 bits (214), Expect = 6e-19
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Frame = +2
Query: 146 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE--RINVYYNEASGGKY 319
RE++ I GQ G Q+G WE+ EHGI G + + L ++ N +++E GK+
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKH 66
Query: 320 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
VPRA+MVDLEP +D +R+G + +F P+ + G+ A NN+A
Sbjct: 67 VPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYA 109
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 90.2 bits (214), Expect = 6e-19
Identities = 37/102 (36%), Positives = 59/102 (57%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MRE++ I GQ G QIG WE+ EHGI G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYA 102
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 85.0 bits (201), Expect = 2e-17
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Frame = +2
Query: 152 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVPRA 331
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 332 VMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWA 448
V+VDLEP ++ + P F +F DN GAGNNWA
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWA 107
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 85.0 bits (201), Expect = 2e-17
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Frame = +2
Query: 152 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVPRA 331
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 332 VMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWA 448
V+VDLEP ++ + P F +F DN GAGNNWA
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWA 107
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 84.2 bits (199), Expect = 4e-17
Identities = 38/102 (37%), Positives = 61/102 (59%)
Frame = +2
Query: 143 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 322
MRE++ I GQ G QIG WE+ EHGI G S + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 323 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 448
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYA 101
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 69.3 bits (162), Expect = 1e-12
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +2
Query: 221 EHGIDATGAYSGDS--DLQLERINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQI 394
EHGI G + D D + E IN ++ E +GGK+VPR + VDLEP +D VR+G + +
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSL 64
Query: 395 FRPDNFVFGQSGAGNNWA 448
F P+ + G+ A N +A
Sbjct: 65 FHPEQLLSGKEDAANCYA 82
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 33.5 bits (73), Expect = 0.073
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +3
Query: 153 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 320
SSTSR + +E SS S T+TA T + TPT + AS ST+T + ++T
Sbjct: 213 SSTSRSTSTPSSTEASSTVTS-TTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTT 267
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 33.5 bits (73), Expect = 0.073
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +3
Query: 153 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 320
SSTSR + +E SS S T+TA T + TPT + AS ST+T + ++T
Sbjct: 195 SSTSRSTSTPSSTEASSTVTS-TTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTT 249
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 292 VDIDAFKLQVGVAAVSTRGVNAVLVR 215
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 292 VDIDAFKLQVGVAAVSTRGVNAVLVR 215
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 292 VDIDAFKLQVGVAAVSTRGVNAVLVR 215
V +D F +QVG+A + TR V + VR
Sbjct: 436 VTVDVFSVQVGIATLQTRDVPVLNVR 461
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 292 VDIDAFKLQVGVAAVSTRGVNAVLVR 215
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 292 VDIDAFKLQVGVAAVSTRGVNAVLVR 215
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 292 VDIDAFKLQVGVAAVSTRGVNAVLVR 215
V +D F +QVG+A + TR V + VR
Sbjct: 436 VTVDVFSVQVGIATLQTRDVPVLNVR 461
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 153 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 320
S TS + + + SS + + +TP TA++PT S ++ S T++ ST
Sbjct: 406 SQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQST 461
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 153 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 320
S TS + + + SS + + +TP TA++PT S ++ S T++ ST
Sbjct: 613 SQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQST 668
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +3
Query: 153 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 320
S TS + + + SS + + +TP TA++PT S ++ S T++ ST
Sbjct: 613 SQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQST 668
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 99 YLIFDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSL 275
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAV 122
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 449 SPSYSPPQTVRRRSCPVGRFAQTARNGRSP 360
SPS SP Q RRR P G +++ R RSP
Sbjct: 456 SPSKSP-QAPRRRRSPSGSKSRSPRRRRSP 484
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 26.6 bits (56), Expect = 8.3
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 304 SFVIVDIDAFKLQVGVAAVSTRGVNAVLV-RDYFPELCSD-LIPALTRLDVDDFPHDCTK 131
SF++VDI+ +V +A ST V + RDY + D LI TRL + P +K
Sbjct: 870 SFIVVDINHSTNEVVLATPSTEQSRIVAIRRDYLCAVSPDGLIYLPTRLHPNHLPTSDSK 929
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,549,320
Number of Sequences: 27780
Number of extensions: 251996
Number of successful extensions: 819
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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