Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13d10
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M60830-1|AAA35816.1|  448|Homo sapiens protein ( Human EVI2B3P g...    31   3.6  
BC005926-1|AAH05926.1|  448|Homo sapiens ecotropic viral integra...    31   3.6  
D86971-1|BAA13207.2|  751|Homo sapiens KIAA0217 protein.               31   4.7  
BC131630-1|AAI31631.1|  738|Homo sapiens La ribonucleoprotein do...    31   4.7  
AL359878-4|CAI13663.2|  738|Homo sapiens La ribonucleoprotein do...    31   4.7  
AL157709-4|CAI39596.2|  738|Homo sapiens La ribonucleoprotein do...    31   4.7  

>M60830-1|AAA35816.1|  448|Homo sapiens protein ( Human EVI2B3P
           gene, exon and complete cds. ).
          Length = 448

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
 Frame = +1

Query: 343 PPKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPL---QSGQTPL 513
           PPK +  T+   +  +  P  K++     +  P +TV N+P  S  G  L    + QTP 
Sbjct: 138 PPKSFVYTFTQQSSSVQIPSRKQITVHNPSTQPTSTVKNSP-RSTPGFILDTTSNKQTPQ 196

Query: 514 NNLTQNIPSVNNPAKI-GMGPEIINMVMGSSGNKPKIQESHIAGQVP 651
            N   +I ++     +  M   II +V+     KP + + + AG+ P
Sbjct: 197 KNNYNSIAAILIGVLLTSMLVAIIIIVLWKCLRKPVLNDQNWAGRSP 243


>BC005926-1|AAH05926.1|  448|Homo sapiens ecotropic viral
           integration site 2B protein.
          Length = 448

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
 Frame = +1

Query: 343 PPKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPL---QSGQTPL 513
           PPK +  T+   +  +  P  K++     +  P +TV N+P  S  G  L    + QTP 
Sbjct: 138 PPKSFVYTFTQQSSSVQIPSRKQITVHNPSTQPTSTVKNSP-RSTPGFILDTTSNKQTPQ 196

Query: 514 NNLTQNIPSVNNPAKI-GMGPEIINMVMGSSGNKPKIQESHIAGQVP 651
            N   +I ++     +  M   II +V+     KP + + + AG+ P
Sbjct: 197 KNNYNSIAAILIGVLLTSMLVAIIIIVLWKCLRKPVLNDQNWAGRSP 243


>D86971-1|BAA13207.2|  751|Homo sapiens KIAA0217 protein.
          Length = 751

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 25/100 (25%), Positives = 43/100 (43%)
 Frame = +1

Query: 346 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 525
           P+ ++ T++YL+  L+ P     + +  T SPA     +P+ S    P +S     ++L 
Sbjct: 374 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 432

Query: 526 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQ 645
             IPS      +   P I N       N  +  ++  AGQ
Sbjct: 433 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ 472


>BC131630-1|AAI31631.1|  738|Homo sapiens La ribonucleoprotein
           domain family, member 5 protein.
          Length = 738

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 25/100 (25%), Positives = 43/100 (43%)
 Frame = +1

Query: 346 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 525
           P+ ++ T++YL+  L+ P     + +  T SPA     +P+ S    P +S     ++L 
Sbjct: 361 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 419

Query: 526 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQ 645
             IPS      +   P I N       N  +  ++  AGQ
Sbjct: 420 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ 459


>AL359878-4|CAI13663.2|  738|Homo sapiens La ribonucleoprotein
           domain family, member 5 protein.
          Length = 738

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 25/100 (25%), Positives = 43/100 (43%)
 Frame = +1

Query: 346 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 525
           P+ ++ T++YL+  L+ P     + +  T SPA     +P+ S    P +S     ++L 
Sbjct: 361 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 419

Query: 526 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQ 645
             IPS      +   P I N       N  +  ++  AGQ
Sbjct: 420 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ 459


>AL157709-4|CAI39596.2|  738|Homo sapiens La ribonucleoprotein
           domain family, member 5 protein.
          Length = 738

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 25/100 (25%), Positives = 43/100 (43%)
 Frame = +1

Query: 346 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 525
           P+ ++ T++YL+  L+ P     + +  T SPA     +P+ S    P +S     ++L 
Sbjct: 361 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 419

Query: 526 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQ 645
             IPS      +   P I N       N  +  ++  AGQ
Sbjct: 420 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ 459


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,088,376
Number of Sequences: 237096
Number of extensions: 1776168
Number of successful extensions: 2792
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2792
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)