Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13d04
         (525 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021282-1|AAX33430.1|  991|Drosophila melanogaster RE36502p pro...    32   0.41 
BT001509-1|AAN71264.1|  746|Drosophila melanogaster LD40727p pro...    32   0.41 
BT001493-1|AAN71248.1|  864|Drosophila melanogaster LD30051p pro...    32   0.41 
AE014297-4178|AAN14129.1|  956|Drosophila melanogaster CG12877-P...    32   0.41 
AE014297-4177|ABC66193.1|  991|Drosophila melanogaster CG12877-P...    32   0.41 
AE014297-4176|AAF56745.1| 1010|Drosophila melanogaster CG12877-P...    32   0.41 
AY071185-1|AAL48807.1|  852|Drosophila melanogaster RE23490p pro...    29   5.1  
AE014296-2741|AAF49460.2|  852|Drosophila melanogaster CG32159-P...    29   5.1  
AY118944-1|AAM50804.1|  941|Drosophila melanogaster LD29915p pro...    28   8.9  
AF255673-1|AAG18328.1| 1011|Drosophila melanogaster rho guanine ...    28   8.9  
AE014296-76|AAF47374.1| 1011|Drosophila melanogaster CG1225-PA, ...    28   8.9  

>BT021282-1|AAX33430.1|  991|Drosophila melanogaster RE36502p
           protein.
          Length = 991

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = -1

Query: 309 KQRD*RKQYNVQAVSELGHSDTTQSLGARSRRSTSNVDLLRASATQSKQRQEYGNHEPDA 130
           K+RD  K+ N +   +  HSD  +S    +  S+S+     +S++ SK+      H  D 
Sbjct: 219 KERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKSSSSDKHRDDK 278

Query: 129 SVDKTHYS 106
           S    H S
Sbjct: 279 SSSSRHKS 286


>BT001509-1|AAN71264.1|  746|Drosophila melanogaster LD40727p
           protein.
          Length = 746

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = -1

Query: 309 KQRD*RKQYNVQAVSELGHSDTTQSLGARSRRSTSNVDLLRASATQSKQRQEYGNHEPDA 130
           K+RD  K+ N +   +  HSD  +S    +  S+S+     +S++ SK+      H  D 
Sbjct: 28  KERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKSSSSDKHRDDK 87

Query: 129 SVDKTHYS 106
           S    H S
Sbjct: 88  SSSSRHKS 95


>BT001493-1|AAN71248.1|  864|Drosophila melanogaster LD30051p
           protein.
          Length = 864

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = -1

Query: 309 KQRD*RKQYNVQAVSELGHSDTTQSLGARSRRSTSNVDLLRASATQSKQRQEYGNHEPDA 130
           K+RD  K+ N +   +  HSD  +S    +  S+S+     +S++ SK+      H  D 
Sbjct: 92  KERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKSSSSDKHRDDK 151

Query: 129 SVDKTHYS 106
           S    H S
Sbjct: 152 SSSSRHKS 159


>AE014297-4178|AAN14129.1|  956|Drosophila melanogaster CG12877-PB,
           isoform B protein.
          Length = 956

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = -1

Query: 309 KQRD*RKQYNVQAVSELGHSDTTQSLGARSRRSTSNVDLLRASATQSKQRQEYGNHEPDA 130
           K+RD  K+ N +   +  HSD  +S    +  S+S+     +S++ SK+      H  D 
Sbjct: 219 KERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKSSSSDKHRDDK 278

Query: 129 SVDKTHYS 106
           S    H S
Sbjct: 279 SSSSRHKS 286


>AE014297-4177|ABC66193.1|  991|Drosophila melanogaster CG12877-PC,
           isoform C protein.
          Length = 991

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = -1

Query: 309 KQRD*RKQYNVQAVSELGHSDTTQSLGARSRRSTSNVDLLRASATQSKQRQEYGNHEPDA 130
           K+RD  K+ N +   +  HSD  +S    +  S+S+     +S++ SK+      H  D 
Sbjct: 219 KERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKSSSSDKHRDDK 278

Query: 129 SVDKTHYS 106
           S    H S
Sbjct: 279 SSSSRHKS 286


>AE014297-4176|AAF56745.1| 1010|Drosophila melanogaster CG12877-PA,
           isoform A protein.
          Length = 1010

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = -1

Query: 309 KQRD*RKQYNVQAVSELGHSDTTQSLGARSRRSTSNVDLLRASATQSKQRQEYGNHEPDA 130
           K+RD  K+ N +   +  HSD  +S    +  S+S+     +S++ SK+      H  D 
Sbjct: 219 KERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKSSSSDKHRDDK 278

Query: 129 SVDKTHYS 106
           S    H S
Sbjct: 279 SSSSRHKS 286


>AY071185-1|AAL48807.1|  852|Drosophila melanogaster RE23490p
           protein.
          Length = 852

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = -1

Query: 384 PKRATPAGRSSSARNTLLATRRAEYKQRD*RKQYNVQAVSELGHSDTTQSLGARSRRSTS 205
           P  +TPA     AR T+ A +  E  +     +    A +EL  +    +LG+R+RRS  
Sbjct: 774 PSSSTPAAEEEEARTTVQAEQETEPAE-----EAVPAATAELTTTAEEAALGSRTRRSLP 828

Query: 204 NVD 196
           + D
Sbjct: 829 DTD 831


>AE014296-2741|AAF49460.2|  852|Drosophila melanogaster CG32159-PB
           protein.
          Length = 852

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = -1

Query: 384 PKRATPAGRSSSARNTLLATRRAEYKQRD*RKQYNVQAVSELGHSDTTQSLGARSRRSTS 205
           P  +TPA     AR T+ A +  E  +     +    A +EL  +    +LG+R+RRS  
Sbjct: 774 PSSSTPAAEEEEARTTVQAEQETEPAE-----EAVPAATAELTTTAEEAALGSRTRRSLP 828

Query: 204 NVD 196
           + D
Sbjct: 829 DTD 831


>AY118944-1|AAM50804.1|  941|Drosophila melanogaster LD29915p
           protein.
          Length = 941

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 411 RSSLRQFSVPKRATPAGRSS 352
           RSSL QFSVP+   P+G S+
Sbjct: 7   RSSLTQFSVPQLEAPSGESA 26


>AF255673-1|AAG18328.1| 1011|Drosophila melanogaster rho guanine
           nucleotide exchangefactor 3 protein.
          Length = 1011

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 411 RSSLRQFSVPKRATPAGRSS 352
           RSSL QFSVP+   P+G S+
Sbjct: 7   RSSLTQFSVPQLEAPSGESA 26


>AE014296-76|AAF47374.1| 1011|Drosophila melanogaster CG1225-PA,
           isoform A protein.
          Length = 1011

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 411 RSSLRQFSVPKRATPAGRSS 352
           RSSL QFSVP+   P+G S+
Sbjct: 7   RSSLTQFSVPQLEAPSGESA 26


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,612,649
Number of Sequences: 53049
Number of extensions: 487839
Number of successful extensions: 1750
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)