Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13d03
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 257 4e-69
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 250 4e-67
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 246 5e-66
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 246 5e-66
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 242 9e-65
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 241 2e-64
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 175 2e-44
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 175 2e-44
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 123 7e-29
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 123 7e-29
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 122 2e-28
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 121 3e-28
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 121 3e-28
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 121 3e-28
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 117 6e-27
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 117 6e-27
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 117 6e-27
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 117 6e-27
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 117 6e-27
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 116 1e-26
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 115 2e-26
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 112 1e-25
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 110 7e-25
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 99 2e-21
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 99 2e-21
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 91 6e-19
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 33 0.091
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 33 0.091
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 28 3.4
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 28 3.4
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 28 3.4
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 27 6.0
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 27 6.0
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 27 6.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 257 bits (629), Expect = 4e-69
Identities = 116/123 (94%), Positives = 121/123 (98%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PRA +VDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 505 RKE 513
RKE
Sbjct: 121 RKE 123
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 250 bits (612), Expect = 4e-67
Identities = 112/123 (91%), Positives = 118/123 (95%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MREIVH+QAGQCGNQIGAKFWEVISDEHGI G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 505 RKE 513
RKE
Sbjct: 121 RKE 123
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 246 bits (603), Expect = 5e-66
Identities = 111/123 (90%), Positives = 117/123 (95%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 505 RKE 513
RKE
Sbjct: 121 RKE 123
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 246 bits (603), Expect = 5e-66
Identities = 111/123 (90%), Positives = 117/123 (95%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 505 RKE 513
RKE
Sbjct: 121 RKE 123
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 242 bits (593), Expect = 9e-65
Identities = 107/123 (86%), Positives = 117/123 (95%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 505 RKE 513
RKE
Sbjct: 121 RKE 123
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 241 bits (590), Expect = 2e-64
Identities = 106/123 (86%), Positives = 117/123 (95%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PRAV+VDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 505 RKE 513
RKE
Sbjct: 121 RKE 123
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 175 bits (425), Expect = 2e-44
Identities = 73/123 (59%), Positives = 98/123 (79%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PRA++VDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 505 RKE 513
R+E
Sbjct: 121 RRE 123
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 175 bits (425), Expect = 2e-44
Identities = 73/123 (59%), Positives = 98/123 (79%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PRA++VDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 505 RKE 513
R+E
Sbjct: 121 RRE 123
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 123 bits (297), Expect = 7e-29
Identities = 51/122 (41%), Positives = 76/122 (62%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MRE++ I GQ G QIG WE+ EHGI G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 505 RK 510
R+
Sbjct: 121 RR 122
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 123 bits (297), Expect = 7e-29
Identities = 51/122 (41%), Positives = 76/122 (62%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MRE++ I GQ G QIG WE+ EHGI G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 505 RK 510
R+
Sbjct: 121 RR 122
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 122 bits (293), Expect = 2e-28
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
Frame = +1
Query: 148 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQLERINVYYNEASGGKYV 324
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PRA+ VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 505 RKE 513
RK+
Sbjct: 126 RKQ 128
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 121 bits (292), Expect = 3e-28
Identities = 51/122 (41%), Positives = 77/122 (63%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MRE++ I GQ G QIG WE+ EHGI G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 505 RK 510
R+
Sbjct: 121 RR 122
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 121 bits (292), Expect = 3e-28
Identities = 57/124 (45%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE--RINVYYNEASGGK 318
MREIV I GQ G QIG WE+ EHGI G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 319 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 498
+VPRA+ VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 499 VVRK 510
VR+
Sbjct: 121 RVRR 124
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 121 bits (292), Expect = 3e-28
Identities = 51/122 (41%), Positives = 77/122 (63%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MRE++ I GQ G QIG WE+ EHGI G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 505 RK 510
R+
Sbjct: 121 RR 122
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 117 bits (281), Expect = 6e-27
Identities = 48/122 (39%), Positives = 75/122 (61%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MRE++ I GQ G QIG WE+ EHGI G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 505 RK 510
R+
Sbjct: 121 RR 122
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 117 bits (281), Expect = 6e-27
Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 318
MRE++ I GQ G QIG WE+ EHGI G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 319 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 498
+VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 499 VVRK 510
+R+
Sbjct: 121 RIRR 124
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 117 bits (281), Expect = 6e-27
Identities = 48/122 (39%), Positives = 75/122 (61%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MRE++ I GQ G QIG WE+ EHGI G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 505 RK 510
R+
Sbjct: 121 RR 122
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 117 bits (281), Expect = 6e-27
Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 318
MRE++ I GQ G QIG WE+ EHGI G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 319 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 498
+VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 499 VVRK 510
+R+
Sbjct: 121 RIRR 124
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 117 bits (281), Expect = 6e-27
Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGK 318
MRE++ I GQ G QIG WE+ EHGI G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 319 YVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 498
+VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 499 VVRK 510
+R+
Sbjct: 121 RIRR 124
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 116 bits (278), Expect = 1e-26
Identities = 51/123 (41%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Frame = +1
Query: 148 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE--RINVYYNEASGGKY 321
RE++ I GQ G Q+G WE+ EHGI G + + L ++ N +++E GK+
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKH 66
Query: 322 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 501
VPRA+MVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D
Sbjct: 67 VPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDR 126
Query: 502 VRK 510
VR+
Sbjct: 127 VRR 129
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 115 bits (276), Expect = 2e-26
Identities = 51/123 (41%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Frame = +1
Query: 148 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL--QLERINVYYNEASGGKY 321
RE++ I GQ G QIG WE+ EHGI G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 322 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 501
VPRAVMVDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 502 VRK 510
+R+
Sbjct: 121 IRR 123
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 112 bits (270), Expect = 1e-25
Identities = 52/123 (42%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Frame = +1
Query: 148 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS--DLQLERINVYYNEASGGKY 321
RE++ I GQ G QIG WE+ EHGI G + D D + E IN ++ E +GGK+
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 322 VPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 501
VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 502 VRK 510
V++
Sbjct: 128 VKR 130
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 110 bits (264), Expect = 7e-25
Identities = 48/122 (39%), Positives = 77/122 (63%)
Frame = +1
Query: 145 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYV 324
MRE++ I GQ G QIG WE+ EHGI G S + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 325 PRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 504
PR++ VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 505 RK 510
R+
Sbjct: 120 RR 121
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Frame = +1
Query: 154 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVPRA 333
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 334 VMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 504
V+VDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 505 RKE 513
+E
Sbjct: 125 IRE 127
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Frame = +1
Query: 154 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERINVYYNEASGGKYVPRA 333
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 334 VMVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 504
V+VDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 505 RKE 513
+E
Sbjct: 125 IRE 127
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 90.6 bits (215), Expect = 6e-19
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Frame = +1
Query: 223 EHGIDATGAYSGDS--DLQLERINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQI 396
EHGI G + D D + E IN ++ E +GGK+VPR + VDLEP +D VR+G + +
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSL 64
Query: 397 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 510
F P+ + G+ A N +A+G YT G E++D V+D V++
Sbjct: 65 FHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKR 102
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 33.5 bits (73), Expect = 0.091
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +2
Query: 155 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 322
SSTSR + +E SS S T+TA T + TPT + AS ST+T + ++T
Sbjct: 213 SSTSRSTSTPSSTEASSTVTS-TTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTT 267
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 33.5 bits (73), Expect = 0.091
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +2
Query: 155 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 322
SSTSR + +E SS S T+TA T + TPT + AS ST+T + ++T
Sbjct: 195 SSTSRSTSTPSSTEASSTVTS-TTTARTTTTMIPTTPTTTTIASTSTVTSIVTSTT 249
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -3
Query: 490 PNQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSP 362
P+Q P SPS SP Q RRR P G +++ R RSP
Sbjct: 443 PSQSKSPAPRRRRSPSKSP-QAPRRRRSPSGSKSRSPRRRRSP 484
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 294 VDIDAFKLQVGVAAVSTRGVNAVLVR 217
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 294 VDIDAFKLQVGVAAVSTRGVNAVLVR 217
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 294 VDIDAFKLQVGVAAVSTRGVNAVLVR 217
V +D F +QVG+A + TR V + VR
Sbjct: 436 VTVDVFSVQVGIATLQTRDVPVLNVR 461
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 294 VDIDAFKLQVGVAAVSTRGVNAVLVR 217
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 294 VDIDAFKLQVGVAAVSTRGVNAVLVR 217
V +D F +QVG+A + TR V + VR
Sbjct: 2133 VTVDVFSVQVGIATLQTRDVPVLNVR 2158
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 294 VDIDAFKLQVGVAAVSTRGVNAVLVR 217
V +D F +QVG+A + TR V + VR
Sbjct: 436 VTVDVFSVQVGIATLQTRDVPVLNVR 461
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 155 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 322
S TS + + + SS + + +TP TA++PT S ++ S T++ ST
Sbjct: 406 SQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQST 461
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 155 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 322
S TS + + + SS + + +TP TA++PT S ++ S T++ ST
Sbjct: 613 SQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQST 668
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 155 SSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSLNASMSTITKLQGAST 322
S TS + + + SS + + +TP TA++PT S ++ S T++ ST
Sbjct: 613 SQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQST 668
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 101 YLIFDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSL 277
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAV 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,879,230
Number of Sequences: 27780
Number of extensions: 291756
Number of successful extensions: 1044
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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