Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13c22
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr...    32   0.33 
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p...    32   0.33 
Z74039-9|CAA98507.1|  564|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U19747-1|AAA92689.1|  564|Caenorhabditis elegans nicotinic acety...    30   1.3  
U19746-1|AAA92688.1|  564|Caenorhabditis elegans nicotinic acety...    30   1.3  
AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm rece...    29   2.3  
AF098997-10|AAC68712.2|  325|Caenorhabditis elegans Serpentine r...    28   7.0  
AF039046-1|AAB94210.1|  458|Caenorhabditis elegans F-box a prote...    28   7.0  
Z81030-9|CAB02713.1|  191|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z77667-3|CAB01237.1|  527|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z77133-6|CAB00869.1|  338|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z69794-6|CAA93683.1|  338|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U21317-9|AAA62530.3|  355|Caenorhabditis elegans Serpentine rece...    27   9.3  

>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 118 KAETKKRSNTLLNICINSSKTEILWTKIKY 207
           K ++ K+SNT+L+ C+   KT+ + T IKY
Sbjct: 862 KVQSHKQSNTMLHECVAQGKTKYIETLIKY 891


>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 118 KAETKKRSNTLLNICINSSKTEILWTKIKY 207
           K ++ K+SNT+L+ C+   KT+ + T IKY
Sbjct: 862 KVQSHKQSNTMLHECVAQGKTKYIETLIKY 891


>Z74039-9|CAA98507.1|  564|Caenorhabditis elegans Hypothetical
           protein K03B8.9 protein.
          Length = 564

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +3

Query: 450 IENTKYYNPLDCSQKLAKISLACYTLICRLNMFQFP-EQENNTLLSETLKHFQNCTKNFV 626
           I+ T  Y   +   +L+ +  A YT+ CRLN+  FP +++N TL   +  + ++    + 
Sbjct: 158 IQATSNYWKGEKGAELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYA 217

Query: 627 EPPNSLQTGNPSKK 668
           +   S+Q+  P+++
Sbjct: 218 DTEVSMQSFIPNEE 231


>U19747-1|AAA92689.1|  564|Caenorhabditis elegans nicotinic
           acetylcholine receptoralpha subunit precursor protein.
          Length = 564

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +3

Query: 450 IENTKYYNPLDCSQKLAKISLACYTLICRLNMFQFP-EQENNTLLSETLKHFQNCTKNFV 626
           I+ T  Y   +   +L+ +  A YT+ CRLN+  FP +++N TL   +  + ++    + 
Sbjct: 158 IQATSNYWKGEKGAELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYA 217

Query: 627 EPPNSLQTGNPSKK 668
           +   S+Q+  P+++
Sbjct: 218 DTEVSMQSFIPNEE 231


>U19746-1|AAA92688.1|  564|Caenorhabditis elegans nicotinic
           acetylcholine receptoralpha subunit protein.
          Length = 564

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +3

Query: 450 IENTKYYNPLDCSQKLAKISLACYTLICRLNMFQFP-EQENNTLLSETLKHFQNCTKNFV 626
           I+ T  Y   +   +L+ +  A YT+ CRLN+  FP +++N TL   +  + ++    + 
Sbjct: 158 IQATSNYWKGEKGAELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISSWTNSKSALDYYA 217

Query: 627 EPPNSLQTGNPSKK 668
           +   S+Q+  P+++
Sbjct: 218 DTEVSMQSFIPNEE 231


>AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 86 protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 507 SLACYTLICRLNMFQFPEQENNTL-LSETLKHFQNCTKNFV 626
           S AC   +C L  F FPE E  ++ LSE    + N T + V
Sbjct: 135 SAACGVSMCILKFFAFPETERRSIELSEEFSLYYNLTMDQV 175


>AF098997-10|AAC68712.2|  325|Caenorhabditis elegans Serpentine
           receptor, class i protein43 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +3

Query: 120 GGNEEKVKYIIEHMYQFLKDRNFMDENKVLSKEHTRLIRKFILYIILNGN 269
           G  +EKV+  I+ MY   K      +N V+ +E+T  +  F+++ +L G+
Sbjct: 151 GVEQEKVEGFIDQMYPDHKTELLSLQNYVIYRENTVYMIFFVIFKMLAGS 200


>AF039046-1|AAB94210.1|  458|Caenorhabditis elegans F-box a protein
           protein 195 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 594 LRFHLIKYYFLVREIETCLICKLMYNMLMIFLPTFVN 484
           +R + +K+Y L+ E +TC IC L  +  +  LP+  N
Sbjct: 53  VRENHMKFYLLISERQTCRICCLSRSANLPNLPSTAN 89


>Z81030-9|CAB02713.1|  191|Caenorhabditis elegans Hypothetical
           protein C01G10.12 protein.
          Length = 191

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +3

Query: 345 YLMCELIWSFQVEHFVYEIISYAYPPLAVEVTGAFIENTKYYNPLDCSQKLAK 503
           ++   L  S+ +    YEII  +      E+  AF++ TK  +P D S+K +K
Sbjct: 4   FIQKRLFASYIIRKNYYEIIGVSASATRQEIRDAFLKKTKQLHP-DQSRKSSK 55


>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical
           protein F21G4.6 protein.
          Length = 1885

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +3

Query: 495 LAKISLACYTLICRLNMFQFPEQENNTLLSETLKHFQNCTKNFV 626
           LA+I+ AC  +    +  Q    + N  L E ++ FQNC KN V
Sbjct: 416 LAEITSACAFMSVMRDWIQVNNIKENKHL-EVMERFQNCLKNCV 458


>Z77667-3|CAB01237.1|  527|Caenorhabditis elegans Hypothetical
           protein M04B2.4 protein.
          Length = 527

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 242 YPIHYFKREFQNIRKVGRKRRY*LSNMDH 328
           Y    +KR FQ  RK   KRR+ +++M H
Sbjct: 54  YDFRRWKRRFQEARKDAFKRRHPIAHMKH 82


>Z77133-6|CAB00869.1|  338|Caenorhabditis elegans Hypothetical
           protein R03G8.5 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 2   ISLPFGFVNKYGFYTRFTCLSRCFYFHR 85
           +S PFGFV   G Y+  TCL    + +R
Sbjct: 82  LSKPFGFVVYTGLYSATTCLIAIQFIYR 109


>Z69794-6|CAA93683.1|  338|Caenorhabditis elegans Hypothetical
           protein R03G8.5 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 2   ISLPFGFVNKYGFYTRFTCLSRCFYFHR 85
           +S PFGFV   G Y+  TCL    + +R
Sbjct: 82  LSKPFGFVVYTGLYSATTCLIAIQFIYR 109


>U21317-9|AAA62530.3|  355|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 1 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 654 FQFVNYXEVQQSFWYNFGNALRFHLIKYY-FLVREIETCL 538
           F  V Y  ++  F YN      F L+ YY FLV    TCL
Sbjct: 40  FLLVIYATIKSPFHYNLNFIGLFMLLGYYVFLVGRFITCL 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,569,530
Number of Sequences: 27780
Number of extensions: 371743
Number of successful extensions: 1101
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)