Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13c20
(509 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861 31 0.41
03_01_0251 - 1956985-1957058,1957238-1957361,1957646-1957744,195... 31 0.54
12_02_1162 + 26612571-26613986,26614095-26614142 30 0.94
03_06_0769 + 36134298-36134356,36134740-36134919,36134975-361350... 30 0.94
10_08_0070 + 14637290-14637766,14639215-14639261,14640043-146401... 30 1.2
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216 30 1.2
03_01_0095 + 759530-760123 29 1.6
02_01_0615 - 4604373-4604537,4604618-4604707,4604871-4604989,460... 29 1.6
09_03_0051 + 11902322-11903125 29 2.2
07_03_1107 - 24024387-24024497,24025799-24026410 29 2.2
05_05_0326 - 24115205-24115482,24115570-24115669,24116914-24117129 29 2.2
11_06_0586 + 25253863-25254285 28 3.8
03_02_0174 + 6142472-6142849 28 3.8
12_02_0588 - 20842209-20842337,20842464-20842560,20842620-208427... 28 5.0
09_03_0150 - 12781628-12781636,12782491-12782571,12783227-127833... 28 5.0
11_01_0112 + 875447-875490,875854-876359,876750-876976,877112-87... 27 6.6
10_01_0088 + 1087807-1088282,1088752-1088974 27 6.6
09_03_0187 - 13253787-13254509 27 6.6
07_03_1208 - 24896905-24896931,24897330-24897341,24898058-248983... 27 6.6
07_01_0702 + 5288588-5288889,5289257-5289407,5289543-5289725,529... 27 6.6
05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,535... 27 6.6
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859 27 6.6
02_03_0041 + 14275897-14276370 27 6.6
01_06_1075 + 34350155-34350709 27 6.6
01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416 27 6.6
09_01_0067 + 1001137-1002708,1003476-1003529 27 8.8
05_03_0627 - 16342211-16342264,16342332-16342412,16342751-163428... 27 8.8
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 27 8.8
02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623 27 8.8
01_06_1076 + 34359922-34360452 27 8.8
>11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861
Length = 592
Score = 31.5 bits (68), Expect = 0.41
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -2
Query: 457 AALGSVRARPWGASSRARRKPGAEAPGGRGHESVPRDPVD 338
A LG + P A S RK A A GRG +SVP P D
Sbjct: 457 ARLGYEKLPPSSALSTPLRKAAATAGSGRGKQSVPSVPPD 496
>03_01_0251 -
1956985-1957058,1957238-1957361,1957646-1957744,
1957821-1957919,1958097-1958195,1958306-1958404,
1958744-1958820,1959232-1959952
Length = 463
Score = 31.1 bits (67), Expect = 0.54
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -2
Query: 418 SSRARRKPGAEAPGGRGHESVPRDPVDA 335
+SR RRKP AEA GG G VP DA
Sbjct: 93 TSRPRRKPAAEAGGGGGSSLVPERWRDA 120
>12_02_1162 + 26612571-26613986,26614095-26614142
Length = 487
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 404 SRAATRAPGPGSHAPERCPPMKDPRAPAYSMG 499
SR R PGP +H E +DP A YS G
Sbjct: 30 SREYIRGPGPETHTTESAQDGQDPPAGVYSYG 61
>03_06_0769 +
36134298-36134356,36134740-36134919,36134975-36135007,
36135008-36135128,36135227-36135266,36135811-36135863,
36135937-36135998,36136354-36136506,36136949-36137160,
36137480-36138972,36140560-36141483,36141734-36142043,
36143818-36143874,36144114-36144167,36144452-36144510
Length = 1269
Score = 30.3 bits (65), Expect = 0.94
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 374 PAWSFGARFPSRAATRAPGPGSHAPERCPPMKDPR 478
P W+ +P + PG + P PPM DPR
Sbjct: 328 PPWAIHPPYPMQGMPYYPGVNPYYPPPYPPMDDPR 362
>10_08_0070 +
14637290-14637766,14639215-14639261,14640043-14640106,
14641022-14641440,14641821-14642055
Length = 413
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -2
Query: 490 VGRSAGVLHRGAALGSVRARPWGASSRARRKPGAEAPGGRGHES 359
+G S G + +G RA PW S RR PGA A GG+ S
Sbjct: 1 MGASPGFKEFISGVGWGRATPW-RSGDERRPPGAGADGGKAMAS 43
>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
Length = 1030
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -2
Query: 457 AALGSVRARP--WGASSRARRKPGAEAPGGRGHESVPRDPVDAV 332
AA GS P + ASS ARR P A A G S P P AV
Sbjct: 14 AAAGSRPLTPKAFSASSSARRTPAAAAAGKENSASKPSKPTAAV 57
>03_01_0095 + 759530-760123
Length = 197
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 389 GARFPSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGA 502
G P RAA APG G+ AP R P++ P P A
Sbjct: 98 GVAVPVRAAA-APGGGAAAPRRSAPVRVPMWPGKGAAA 134
>02_01_0615 -
4604373-4604537,4604618-4604707,4604871-4604989,
4605132-4605234,4605318-4605414,4605512-4605575,
4605673-4605805,4605899-4606143,4606263-4606439,
4607110-4607419
Length = 500
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 368 SAPAWSFGARFPSRAATRAPGPGSHAPERCPPMKDPRAPAYSMG 499
S PA R P+ AA+ +PGPG +P P P APA + G
Sbjct: 29 SLPANGRTHRSPAAAASPSPGPGP-SPAPATPRVVPPAPAPATG 71
>09_03_0051 + 11902322-11903125
Length = 267
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 362 LVSAPAWSFGARFPSRAATRAPGPGSHAPERCPP-MKDPRAP 484
+ S P+ SF A P A R P P +P PP +P+ P
Sbjct: 71 IFSFPSASFYAFHPDAAEPRTPTPRKRSPVAAPPAASEPQTP 112
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 392 ARFPSRAATRAPG--PGSHAPERCPPMKDPRAPA 487
A P+ AT AP P + AP + PP K +APA
Sbjct: 63 AAAPTTPATPAPAEAPTTPAPTKAPPTKSTKAPA 96
>05_05_0326 - 24115205-24115482,24115570-24115669,24116914-24117129
Length = 197
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 247 VLLVADRRGQQVRAGAGPCATHYTQLSLPTVSSSKG 140
V +ADRRG+Q A G + H+ +L P S G
Sbjct: 63 VFQMADRRGKQDVAAGGDQSPHHQELRRPASKESSG 98
>11_06_0586 + 25253863-25254285
Length = 140
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -2
Query: 487 GRSAGVLHRGAALGSVRARPWGASSRARRKPGAEAPGGRG 368
G AGV A L ARP GA +R R+ EA GG G
Sbjct: 94 GGQAGVEEVAATLEEATARPAGARARRHRR--LEAAGGVG 131
>03_02_0174 + 6142472-6142849
Length = 125
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 509 RVERPWSRQERGGPSSGGSARERASPALG 423
R RPW R G GG AR RA +G
Sbjct: 76 RRRRPWRRGGARGQGRGGGARGRAKVVMG 104
>12_02_0588 -
20842209-20842337,20842464-20842560,20842620-20842733,
20843140-20843749,20844739-20845462,20845542-20845620,
20845783-20845865,20846148-20846226,20846332-20846420,
20846499-20846591,20847288-20847337,20847417-20847600,
20849227-20849542,20849626-20849657
Length = 892
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -2
Query: 499 AHGVGRSAGVLHRGAALGSVRARPW-GASSRARRKPGAEAPGGRGHESVPRDPVDA 335
A G GR G+ AAL A PW + A G E GG V PV+A
Sbjct: 23 AAGRGRGGGLAEAAAALEGFLADPWLLRPAAAGEGVGVEEEGGVATVQVEVPPVEA 78
>09_03_0150 -
12781628-12781636,12782491-12782571,12783227-12783304,
12783456-12783508,12784660-12784864
Length = 141
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 341 DRVTRDGLVSAPAWSFGARFPSRAATRAPGP 433
DR T + VS PAW GA+ + PGP
Sbjct: 28 DRFTYEDAVSHPAWCEGAKAINIPGEAGPGP 58
>11_01_0112 +
875447-875490,875854-876359,876750-876976,877112-877237,
877313-877359,877888-878251,878396-878779
Length = 565
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 496 HGVGRSAGVLHRGAALGSVR-ARPWGASSRARRKPGAEAPGGRGHESV 356
HG G S G GA + R R WG +RAR + G A GR V
Sbjct: 115 HGRGSSGGSGRHGAEEEAARLGRGWGV-ARARVRLGRGAKWGRARRGV 161
>10_01_0088 + 1087807-1088282,1088752-1088974
Length = 232
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 487 GRSAGVLHRGAALGSVRARPWGASSRARRKPGA--EAPGGRG 368
GRS V+ G G+ RA P G RR+ GA A GG G
Sbjct: 19 GRSCAVVEAGGVQGA-RATPAGGHGGDRRRKGAGLAAAGGDG 59
>09_03_0187 - 13253787-13254509
Length = 240
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 459 GQRSGACEPGPGARVAARDGNLAPKL-QAGADTSPSRV 349
GQR+ G GA A G+ APKL AG TS RV
Sbjct: 43 GQRTAYLADGSGAAEARTTGSGAPKLGMAGFATSEFRV 80
>07_03_1208 -
24896905-24896931,24897330-24897341,24898058-24898333,
24898410-24898466,24898561-24898638,24899112-24899198,
24899815-24899904,24900012-24900218
Length = 277
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 234 PTVVGSRYAPGPGPVRRITHSCHCLRYP 151
P + R P P P RRI HC + P
Sbjct: 27 PLISQRRRLPSPAPARRIQLRSHCTKSP 54
>07_01_0702 +
5288588-5288889,5289257-5289407,5289543-5289725,
5290063-5290137,5290248-5290403,5290502-5290597,
5290855-5290985,5291057-5291138,5291237-5291586,
5293029-5293234,5293254-5293570
Length = 682
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 453 RSGACEPGPGARVAARDGNLAPKLQAGADTSP 358
R G+ EPGP + AAR G P+ AG P
Sbjct: 532 RRGSIEPGPAPKPAARRGK--PRRSAGRTLHP 561
>05_01_0595 +
5344721-5345249,5349183-5349264,5349813-5350507,
5350583-5350839,5350934-5351615,5351689-5351892,
5351981-5352715,5352799-5353181
Length = 1188
Score = 27.5 bits (58), Expect = 6.6
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -2
Query: 502 SAHGVGRSAGVLHRGAALGSVRARPWGASSRARRKPGAEAPG----GRGHESVPRDPV 341
S G G++AGV A R GA++ AR + A AP R S RDPV
Sbjct: 157 SVVGAGQAAGVAGARRAWWRAALRTEGATACARARSAASAPARPVPARVEMSDSRDPV 214
>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
Length = 429
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 401 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGAR 505
PS AA AP PG C K P+ A GA+
Sbjct: 329 PSGAAASAPAPGDRRCSHCGVQKTPQWRAGPEGAK 363
>02_03_0041 + 14275897-14276370
Length = 157
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 283 ERVHGAPVARWVVLLVADRRGQQVRAGAGPCATHYTQLSLPTVSSSKG 140
E G PV VV AD + + R +G AT + +LP VS+ G
Sbjct: 89 EEEDGVPVPGEVVATTADAQETRQRRNSGSNATVAGEDALPEVSAGNG 136
>01_06_1075 + 34350155-34350709
Length = 184
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3
Query: 483 GARGSFIGGQRSGACEPGPGARVAARDGNLA 391
G G + GA EPGPGA A+ D A
Sbjct: 88 GGGGGELAAASDGAGEPGPGAAAASPDTGAA 118
>01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416
Length = 302
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -2
Query: 508 ESSAHGVGRSAGVLHRGAALGSVRARPWGAS-SRARRKPGAEAPGGRGHES 359
+ HG SA G L R WG S AR +PGA+ GG E+
Sbjct: 218 DEKQHGTSSSAA---DGGGLRRGRHDGWGRRRSSAREEPGADQQGGNSGET 265
>09_01_0067 + 1001137-1002708,1003476-1003529
Length = 541
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 368 SAPAWSFGARFPSRAATRAPGPGSHAPERCPPMKDPRAPA 487
SAP + P +P P HAP + P D APA
Sbjct: 6 SAPRYHHHRHPPRNPPPPSPPPADHAPPQPLPTPDDDAPA 45
>05_03_0627 -
16342211-16342264,16342332-16342412,16342751-16342849,
16343660-16343770,16343964-16344116,16344741-16344881,
16345456-16345513,16345852-16345967,16346292-16346405,
16346496-16346557,16348788-16348930,16349030-16349097,
16349200-16349379,16349835-16350013,16350447-16350636,
16350920-16350978,16351421-16351574,16352133-16352158,
16352567-16353014
Length = 811
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +2
Query: 356 DGL---VSAPAWSFGARFPSRAATRAPGPGSHAPERCP 460
DGL SA G R P RAA ++P P P R P
Sbjct: 43 DGLSRSASAQRRGGGGRAPPRAAGKSPAPPPPPPRRAP 80
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 404 SRAATRAPGPGSHAPERCPPMKDPRAP 484
S ++++P PGS P PP P AP
Sbjct: 1143 SPPSSQSPPPGSSPPPASPPPSTPSAP 1169
>02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623
Length = 400
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 487 GRSAGVLHRGAALGSVRARPWGASSRARRKPGAEAPGGRG 368
G AG H GA G+ AR + GA A GGRG
Sbjct: 267 GAGAGGGHGGAGAGAGGARGGAGAGGGHGGAGAGAGGGRG 306
>01_06_1076 + 34359922-34360452
Length = 176
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 442 VRARPWGASSRARRKPGAEAPGGRGHESVPRDPVDAV 332
VR RP A S+ + A +PGG G +S +D +
Sbjct: 109 VRCRPMVACSKRQSARSARSPGGDGDDSEAGTRLDGI 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,062,833
Number of Sequences: 37544
Number of extensions: 266044
Number of successful extensions: 1476
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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