Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13c20
         (509 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   5.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   5.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.8  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +2

Query: 101  LYSYIIKIQHGKKTFRRGYRRQ*QLCVMRRTGPGP 205
            L+S  ++++HG    R     +   CV+R + P P
Sbjct: 1081 LHSLAVELEHGAAGLRLCLHHRDLPCVLRASTPAP 1115


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 353 RDGLVSAPAWSFGARFPSRAAT 418
           R+GL+    W +G  F S  AT
Sbjct: 154 RNGLLPLLVWIYGGGFMSGTAT 175


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 353 RDGLVSAPAWSFGARFPSRAAT 418
           R+GL+    W +G  F S  AT
Sbjct: 154 RNGLLPLLVWIYGGGFMSGTAT 175


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -2

Query: 424 GASSRARRKPGAEAPGGRGHESVPRD 347
           G  SRAR +      G R    +PRD
Sbjct: 159 GIFSRAREEANVVPEGARVPIEIPRD 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,461
Number of Sequences: 438
Number of extensions: 2612
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)