SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13c19
         (606 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036379-1|AAH36379.1|  794|Homo sapiens KIAA0776 protein.            169   9e-42
BC028608-1|AAH28608.1|  509|Homo sapiens KIAA0776 protein protein.    169   9e-42
BC015377-1|AAH15377.1|  418|Homo sapiens Unknown (protein for IM...   169   9e-42
AL590404-1|CAH73710.1|  794|Homo sapiens RP3-393D12.1 protein.        169   9e-42
AL132776-3|CAI20401.1|  794|Homo sapiens RP3-393D12.1 protein.        169   9e-42
AB018319-1|BAA34496.1|  799|Homo sapiens KIAA0776 protein protein.    169   9e-42
U03892-1|AAA20442.1|  169|Homo sapiens rheumatoid factor C1 IgG ...    31   2.4  
L22586-1|AAA52897.1|  169|Homo sapiens immunoglobulin heavy chai...    31   2.4  
AY358109-1|AAQ88476.1|  115|Homo sapiens ACAH3104 protein.             31   3.1  
AY909721-1|AAY57169.1|  119|Homo sapiens immunoglobulin heavy ch...    31   4.2  
K02765-1|AAA85332.1| 1663|Homo sapiens complement component C3 p...    30   5.5  
BC150200-1|AAI50201.1| 1663|Homo sapiens complement component 3 ...    30   5.5  
BC150179-1|AAI50180.1| 1663|Homo sapiens complement component 3 ...    30   5.5  
AY513239-1|AAR89906.1| 1663|Homo sapiens complement component 3 ...    30   5.5  
AY971028-1|AAY18449.1|  155|Homo sapiens immunoglobulin alpha he...    29   9.6  

>BC036379-1|AAH36379.1|  794|Homo sapiens KIAA0776 protein.
          Length = 794

 Score =  169 bits (410), Expect = 9e-42
 Identities = 82/147 (55%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
 Frame = +3

Query: 168 ATDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQ 347
           A  W+EI+RLAADFQ+AQ +   QRLSERNCIEIV KLI  K ++V+ T DGKEY+T  Q
Sbjct: 2   ADAWEEIRRLAADFQRAQFAEATQRLSERNCIEIVNKLIAQKQLEVVHTLDGKEYITPAQ 61

Query: 348 LIKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEIVKG-KDVQLISGYLITNYYLE 524
           + KEM+DEL+V GGR+N VDL + +NVD  HI   I +I+K  K VQL+ G LI   YL+
Sbjct: 62  ISKEMRDELHVRGGRVNIVDLQQVINVDLIHIENRIGDIIKSEKHVQLVLGQLIDENYLD 121

Query: 525 KIAREVNEKLQLQGYISVGELTLHYDL 605
           ++A EVN+KLQ  G +++ EL   YDL
Sbjct: 122 RLAEEVNDKLQESGQVTISELCKTYDL 148


>BC028608-1|AAH28608.1|  509|Homo sapiens KIAA0776 protein protein.
          Length = 509

 Score =  169 bits (410), Expect = 9e-42
 Identities = 82/147 (55%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
 Frame = +3

Query: 168 ATDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQ 347
           A  W+EI+RLAADFQ+AQ +   QRLSERNCIEIV KLI  K ++V+ T DGKEY+T  Q
Sbjct: 2   ADAWEEIRRLAADFQRAQFAEATQRLSERNCIEIVNKLIAQKQLEVVHTLDGKEYITPAQ 61

Query: 348 LIKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEIVKG-KDVQLISGYLITNYYLE 524
           + KEM+DEL+V GGR+N VDL + +NVD  HI   I +I+K  K VQL+ G LI   YL+
Sbjct: 62  ISKEMRDELHVRGGRVNIVDLQQVINVDLIHIENRIGDIIKSEKHVQLVLGQLIDENYLD 121

Query: 525 KIAREVNEKLQLQGYISVGELTLHYDL 605
           ++A EVN+KLQ  G +++ EL   YDL
Sbjct: 122 RLAEEVNDKLQESGQVTISELCKTYDL 148


>BC015377-1|AAH15377.1|  418|Homo sapiens Unknown (protein for
           IMAGE:4426923) protein.
          Length = 418

 Score =  169 bits (410), Expect = 9e-42
 Identities = 82/147 (55%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
 Frame = +3

Query: 168 ATDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQ 347
           A  W+EI+RLAADFQ+AQ +   QRLSERNCIEIV KLI  K ++V+ T DGKEY+T  Q
Sbjct: 2   ADAWEEIRRLAADFQRAQFAEATQRLSERNCIEIVNKLIAQKQLEVVHTLDGKEYITPAQ 61

Query: 348 LIKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEIVKG-KDVQLISGYLITNYYLE 524
           + KEM+DEL+V GGR+N VDL + +NVD  HI   I +I+K  K VQL+ G LI   YL+
Sbjct: 62  ISKEMRDELHVRGGRVNIVDLQQVINVDLIHIENRIGDIIKSEKHVQLVLGQLIDENYLD 121

Query: 525 KIAREVNEKLQLQGYISVGELTLHYDL 605
           ++A EVN+KLQ  G +++ EL   YDL
Sbjct: 122 RLAEEVNDKLQESGQVTISELCKTYDL 148


>AL590404-1|CAH73710.1|  794|Homo sapiens RP3-393D12.1 protein.
          Length = 794

 Score =  169 bits (410), Expect = 9e-42
 Identities = 82/147 (55%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
 Frame = +3

Query: 168 ATDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQ 347
           A  W+EI+RLAADFQ+AQ +   QRLSERNCIEIV KLI  K ++V+ T DGKEY+T  Q
Sbjct: 2   ADAWEEIRRLAADFQRAQFAEATQRLSERNCIEIVNKLIAQKQLEVVHTLDGKEYITPAQ 61

Query: 348 LIKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEIVKG-KDVQLISGYLITNYYLE 524
           + KEM+DEL+V GGR+N VDL + +NVD  HI   I +I+K  K VQL+ G LI   YL+
Sbjct: 62  ISKEMRDELHVRGGRVNIVDLQQVINVDLIHIENRIGDIIKSEKHVQLVLGQLIDENYLD 121

Query: 525 KIAREVNEKLQLQGYISVGELTLHYDL 605
           ++A EVN+KLQ  G +++ EL   YDL
Sbjct: 122 RLAEEVNDKLQESGQVTISELCKTYDL 148


>AL132776-3|CAI20401.1|  794|Homo sapiens RP3-393D12.1 protein.
          Length = 794

 Score =  169 bits (410), Expect = 9e-42
 Identities = 82/147 (55%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
 Frame = +3

Query: 168 ATDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQ 347
           A  W+EI+RLAADFQ+AQ +   QRLSERNCIEIV KLI  K ++V+ T DGKEY+T  Q
Sbjct: 2   ADAWEEIRRLAADFQRAQFAEATQRLSERNCIEIVNKLIAQKQLEVVHTLDGKEYITPAQ 61

Query: 348 LIKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEIVKG-KDVQLISGYLITNYYLE 524
           + KEM+DEL+V GGR+N VDL + +NVD  HI   I +I+K  K VQL+ G LI   YL+
Sbjct: 62  ISKEMRDELHVRGGRVNIVDLQQVINVDLIHIENRIGDIIKSEKHVQLVLGQLIDENYLD 121

Query: 525 KIAREVNEKLQLQGYISVGELTLHYDL 605
           ++A EVN+KLQ  G +++ EL   YDL
Sbjct: 122 RLAEEVNDKLQESGQVTISELCKTYDL 148


>AB018319-1|BAA34496.1|  799|Homo sapiens KIAA0776 protein protein.
          Length = 799

 Score =  169 bits (410), Expect = 9e-42
 Identities = 82/147 (55%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
 Frame = +3

Query: 168 ATDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQ 347
           A  W+EI+RLAADFQ+AQ +   QRLSERNCIEIV KLI  K ++V+ T DGKEY+T  Q
Sbjct: 7   ADAWEEIRRLAADFQRAQFAEATQRLSERNCIEIVNKLIAQKQLEVVHTLDGKEYITPAQ 66

Query: 348 LIKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEIVKG-KDVQLISGYLITNYYLE 524
           + KEM+DEL+V GGR+N VDL + +NVD  HI   I +I+K  K VQL+ G LI   YL+
Sbjct: 67  ISKEMRDELHVRGGRVNIVDLQQVINVDLIHIENRIGDIIKSEKHVQLVLGQLIDENYLD 126

Query: 525 KIAREVNEKLQLQGYISVGELTLHYDL 605
           ++A EVN+KLQ  G +++ EL   YDL
Sbjct: 127 RLAEEVNDKLQESGQVTISELCKTYDL 153


>U03892-1|AAA20442.1|  169|Homo sapiens rheumatoid factor C1 IgG
           heavy chain VH1 region protein.
          Length = 169

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 492 SGYLITNYYLEKIAREVNEKLQLQGYISVGELTLH 596
           SGY  TNYY+  + +   + L+  G I+ G+ T H
Sbjct: 44  SGYTFTNYYIHWVRQAPGQGLEWMGMINPGDDTTH 78


>L22586-1|AAA52897.1|  169|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 169

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 492 SGYLITNYYLEKIAREVNEKLQLQGYISVGELTLH 596
           SGY  TNYY+  + +   + L+  G I+ G+ T H
Sbjct: 44  SGYTFTNYYIHWVRQAPGQGLEWMGMINPGDDTTH 78


>AY358109-1|AAQ88476.1|  115|Homo sapiens ACAH3104 protein.
          Length = 115

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 603 NHNARLIPQQICSLEAVTFRLLLWQFF 523
           +HNA  +PQ +CSL ++ F   LW FF
Sbjct: 39  HHNA--VPQLLCSLSSICFPHSLWDFF 63


>AY909721-1|AAY57169.1|  119|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 119

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 492 SGYLITNYYLEKIAREVNEKLQLQGYISVGELTLHY 599
           SG+  ++YY+  I +   + L+   YIS G +T++Y
Sbjct: 25  SGFTFSDYYMSWIRQAPGKGLEWVSYISSGSITIYY 60


>K02765-1|AAA85332.1| 1663|Homo sapiens complement component C3
            protein.
          Length = 1663

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +3

Query: 180  DEIKRLAAD---FQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSL-Q 347
            DE+ R A +    QK+    T +   ++ C   V  + + +L+ V  +ND  EY+ ++ Q
Sbjct: 1508 DELCRCAEENCFIQKSDDKVTLEERLDKACEPGVDYVYKTRLVKVQLSNDFDEYIMAIEQ 1567

Query: 348  LIKEMKDELYV 380
             IK   DE+ V
Sbjct: 1568 TIKSGSDEVQV 1578


>BC150200-1|AAI50201.1| 1663|Homo sapiens complement component 3
            protein.
          Length = 1663

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +3

Query: 180  DEIKRLAAD---FQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSL-Q 347
            DE+ R A +    QK+    T +   ++ C   V  + + +L+ V  +ND  EY+ ++ Q
Sbjct: 1508 DELCRCAEENCFIQKSDDKVTLEERLDKACEPGVDYVYKTRLVKVQLSNDFDEYIMAIEQ 1567

Query: 348  LIKEMKDELYV 380
             IK   DE+ V
Sbjct: 1568 TIKSGSDEVQV 1578


>BC150179-1|AAI50180.1| 1663|Homo sapiens complement component 3
            protein.
          Length = 1663

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +3

Query: 180  DEIKRLAAD---FQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSL-Q 347
            DE+ R A +    QK+    T +   ++ C   V  + + +L+ V  +ND  EY+ ++ Q
Sbjct: 1508 DELCRCAEENCFIQKSDDKVTLEERLDKACEPGVDYVYKTRLVKVQLSNDFDEYIMAIEQ 1567

Query: 348  LIKEMKDELYV 380
             IK   DE+ V
Sbjct: 1568 TIKSGSDEVQV 1578


>AY513239-1|AAR89906.1| 1663|Homo sapiens complement component 3
            protein.
          Length = 1663

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +3

Query: 180  DEIKRLAAD---FQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSL-Q 347
            DE+ R A +    QK+    T +   ++ C   V  + + +L+ V  +ND  EY+ ++ Q
Sbjct: 1508 DELCRCAEENCFIQKSDDKVTLEERLDKACEPGVDYVYKTRLVKVQLSNDFDEYIMAIEQ 1567

Query: 348  LIKEMKDELYV 380
             IK   DE+ V
Sbjct: 1568 TIKSGSDEVQV 1578


>AY971028-1|AAY18449.1|  155|Homo sapiens immunoglobulin alpha heavy
           chain variable region protein.
          Length = 155

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 492 SGYLITNYYLEKIAREVNEKLQLQGYISVG 581
           SGY+++N+YL  + +   + L+  G I+VG
Sbjct: 25  SGYIVSNHYLHWVRQAPGQGLEWMGMINVG 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,566,897
Number of Sequences: 237096
Number of extensions: 1449754
Number of successful extensions: 5062
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5056
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -