Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13c19
         (606 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61947-7|AAB03137.1|  735|Caenorhabditis elegans Hypothetical pr...   106   1e-23
Z49886-2|CAA90051.1|  268|Caenorhabditis elegans Hypothetical pr...    33   0.12 
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p...    28   4.5  
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U41995-8|AAN84829.1|  350|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U41995-7|AAP68946.1|  405|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U28735-1|AAG38886.2|  272|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical...    28   5.9  
AF039052-10|AAF98634.1|  536|Caenorhabditis elegans Hypothetical...    28   5.9  
Z77659-6|CAB01167.1|  401|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>U61947-7|AAB03137.1|  735|Caenorhabditis elegans Hypothetical
           protein C06G3.9 protein.
          Length = 735

 Score =  106 bits (254), Expect = 1e-23
 Identities = 56/146 (38%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
 Frame = +3

Query: 171 TDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQL 350
           T W +I++LA+D Q+ QLS ++++LSE NCIE++ KLI    IDV++T DG  Y+T   L
Sbjct: 2   TSWADIQKLASDLQRVQLSQSSKKLSEVNCIEVLQKLIASHRIDVVYTRDGHSYVTKNHL 61

Query: 351 IKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEIVKGKDVQLIS-GYLITNYYLEK 527
             E+K+E    GGR +  D+A  LN+DF+HI      IV   D   IS   +    Y+ +
Sbjct: 62  ETEIKNECIAAGGRASLTDIAVALNIDFDHIEKTSRLIVSTDDEFTISNAEIFATEYVHR 121

Query: 528 IAREVNEKLQLQGYISVGELTLHYDL 605
           +  E+   L  QG  +   L  H++L
Sbjct: 122 LRNELRTLLDEQGNQTTAALCKHWNL 147


>Z49886-2|CAA90051.1|  268|Caenorhabditis elegans Hypothetical
           protein C06A1.2 protein.
          Length = 268

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -3

Query: 469 FTISGMCVVMWLKSTFNSLAKSTVFIRPPCTYNSSFISFISWSEVRYSLPSFV 311
           F+   MCVV+WL+    +L+K+ +F   PC+ +S    F   S   Y +P  +
Sbjct: 116 FSQISMCVVVWLEEEMGNLSKNMLFFFLPCSPSSILCLFRCAS--HYDIPIII 166


>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
           protein ZK1251.9 protein.
          Length = 1701

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 249 ERNCIEIVTKLIEL-KLIDVIFTNDGKEYLTSLQLIKEMKDELYVHGG 389
           E N +EI+   I+L K  DV  T D  +YLTSL + ++   E    GG
Sbjct: 344 EGNALEILFDYIDLEKSKDVRLTFDALKYLTSLLVHRKFALEFVNKGG 391


>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
           protein ZK1251.9 protein.
          Length = 1701

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 249 ERNCIEIVTKLIEL-KLIDVIFTNDGKEYLTSLQLIKEMKDELYVHGG 389
           E N +EI+   I+L K  DV  T D  +YLTSL + ++   E    GG
Sbjct: 344 EGNALEILFDYIDLEKSKDVRLTFDALKYLTSLLVHRKFALEFVNKGG 391


>U41995-8|AAN84829.1|  350|Caenorhabditis elegans Hypothetical
           protein E02C12.8a protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +1

Query: 1   DVYYSKR-KIVDTIPYFESIILVRSISIETVIKIL 102
           D+ Y+K   I+D +P  +++ + +SIS +T+I I+
Sbjct: 131 DIPYTKGYMIIDFVPNIQTVEMYKSISADTIIPII 165


>U41995-7|AAP68946.1|  405|Caenorhabditis elegans Hypothetical
           protein E02C12.8c protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +1

Query: 1   DVYYSKR-KIVDTIPYFESIILVRSISIETVIKIL 102
           D+ Y+K   I+D +P  +++ + +SIS +T+I I+
Sbjct: 131 DIPYTKGYMIIDFVPNIQTVEMYKSISADTIIPII 165


>U28735-1|AAG38886.2|  272|Caenorhabditis elegans Hypothetical
           protein F48E3.9 protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
 Frame = +3

Query: 138 LSKQYSTMAPATDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTN 317
           + K+   +APA    E+K +A D +K  LS    RL+  +   + T ++ L+  D + + 
Sbjct: 15  MQKRIDELAPACAEKELKIVAKDNEKLDLSKKL-RLANSDISHLQTSMMHLR--DEVSSK 71

Query: 318 DGKEYLTSLQLIKEMKDELYV---HGGRINTVDLAKELNVDFNHITTHIPEIVKGKDVQL 488
           D  E  +    I  +K +L +       +   DL  +  +      T   E+ +  D +L
Sbjct: 72  D-NELKSMNDDILYLKSQLLIVESESRELKAKDLENQERIHAYIQQTREYELTQINDKKL 130

Query: 489 ISGYLITNYYLEKIAREVNEKL 554
           I   +  N  L K   +V+ KL
Sbjct: 131 IDKVIEENSSLIKENAKVSTKL 152


>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
           protein Y45F10B.10 protein.
          Length = 1592

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 405 DLAKELNVDFN-HITTHIPEIVKGKDVQLISGYLITNYYLEKIAREVNEKLQ 557
           DL  E+ +  N  + TH+    +  D+         + Y EKIAR+ NEKL+
Sbjct: 257 DLKNEITLKMNDRVMTHVLR-PESTDINYFFNSRDGDKYREKIARQFNEKLK 307


>AF039052-10|AAF98634.1|  536|Caenorhabditis elegans Hypothetical
           protein T22D1.1 protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 528 FFPNNNL*SNNQISTEHLCLLQFPECA 448
           F PN N+   NQ   E  CLLQ+ E A
Sbjct: 236 FEPNGNIEWRNQAGAETDCLLQYKEAA 262


>Z77659-6|CAB01167.1|  401|Caenorhabditis elegans Hypothetical
           protein F23B12.6 protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 506 YKLLFGKNCQRSKRKVTASRLHIC-WGIN 589
           Y L + KNC  S   + ASR  +C WG+N
Sbjct: 69  YLLRYLKNCPSSYATLDASRSWMCYWGVN 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,758,232
Number of Sequences: 27780
Number of extensions: 251837
Number of successful extensions: 619
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)