Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13c09
         (564 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067740-1|AAH67740.2|  270|Homo sapiens chromosome 10 open read...    72   1e-12
BC028589-1|AAH28589.2|  270|Homo sapiens chromosome 10 open read...    72   1e-12
BC018660-1|AAH18660.3|  270|Homo sapiens chromosome 10 open read...    72   1e-12
AL133417-1|CAH73826.2|  270|Homo sapiens chromosome 10 open read...    72   1e-12
AK027453-1|BAB55123.1|  228|Homo sapiens protein ( Homo sapiens ...    72   1e-12
BC027589-1|AAH27589.1|  411|Homo sapiens LRRC6 protein protein.        31   2.8  
BC050653-1|AAH50653.1|  213|Homo sapiens NICN1 protein protein.        30   4.9  
BC047286-1|AAH47286.1|  466|Homo sapiens leucine rich repeat con...    30   4.9  
BC005050-1|AAH05050.1|  213|Homo sapiens NICN1 protein protein.        30   4.9  
AJ299740-1|CAC82516.1|  213|Homo sapiens nicolin 1 protein.            30   4.9  
AF538150-1|AAN52734.1|  169|Homo sapiens NPCEDRGP protein.             30   4.9  

>BC067740-1|AAH67740.2|  270|Homo sapiens chromosome 10 open reading
           frame 22 protein.
          Length = 270

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 35/85 (41%), Positives = 51/85 (60%)
 Frame = +2

Query: 203 FTTNLNKLKSMMDHLKAEDFAFDNSLNDIETWRQPLKAPCTYIKVFEDYQINMSIFVLKP 382
           F  NL+KLKS++  L+AED         ++    P   P TY+ ++E    ++ +F+LK 
Sbjct: 47  FPENLSKLKSLLTQLRAEDLNIAPRKATLQPL-PPNLPPVTYMHIYETDGFSLGVFLLKS 105

Query: 383 GFRMPLHDHPRMHGLLKVITGAVNI 457
           G  +PLHDHP MHG+LKV+ G V I
Sbjct: 106 GTSIPLHDHPGMHGMLKVLYGTVRI 130


>BC028589-1|AAH28589.2|  270|Homo sapiens chromosome 10 open reading
           frame 22 protein.
          Length = 270

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 35/85 (41%), Positives = 51/85 (60%)
 Frame = +2

Query: 203 FTTNLNKLKSMMDHLKAEDFAFDNSLNDIETWRQPLKAPCTYIKVFEDYQINMSIFVLKP 382
           F  NL+KLKS++  L+AED         ++    P   P TY+ ++E    ++ +F+LK 
Sbjct: 47  FPENLSKLKSLLTQLRAEDLNIAPRKATLQPL-PPNLPPVTYMHIYETDGFSLGVFLLKS 105

Query: 383 GFRMPLHDHPRMHGLLKVITGAVNI 457
           G  +PLHDHP MHG+LKV+ G V I
Sbjct: 106 GTSIPLHDHPGMHGMLKVLYGTVRI 130


>BC018660-1|AAH18660.3|  270|Homo sapiens chromosome 10 open reading
           frame 22 protein.
          Length = 270

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 35/85 (41%), Positives = 51/85 (60%)
 Frame = +2

Query: 203 FTTNLNKLKSMMDHLKAEDFAFDNSLNDIETWRQPLKAPCTYIKVFEDYQINMSIFVLKP 382
           F  NL+KLKS++  L+AED         ++    P   P TY+ ++E    ++ +F+LK 
Sbjct: 47  FPENLSKLKSLLTQLRAEDLNIAPRKATLQPL-PPNLPPVTYMHIYETDGFSLGVFLLKS 105

Query: 383 GFRMPLHDHPRMHGLLKVITGAVNI 457
           G  +PLHDHP MHG+LKV+ G V I
Sbjct: 106 GTSIPLHDHPGMHGMLKVLYGTVRI 130


>AL133417-1|CAH73826.2|  270|Homo sapiens chromosome 10 open reading
           frame 22 protein.
          Length = 270

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 35/85 (41%), Positives = 51/85 (60%)
 Frame = +2

Query: 203 FTTNLNKLKSMMDHLKAEDFAFDNSLNDIETWRQPLKAPCTYIKVFEDYQINMSIFVLKP 382
           F  NL+KLKS++  L+AED         ++    P   P TY+ ++E    ++ +F+LK 
Sbjct: 47  FPENLSKLKSLLTQLRAEDLNIAPRKATLQPL-PPNLPPVTYMHIYETDGFSLGVFLLKS 105

Query: 383 GFRMPLHDHPRMHGLLKVITGAVNI 457
           G  +PLHDHP MHG+LKV+ G V I
Sbjct: 106 GTSIPLHDHPGMHGMLKVLYGTVRI 130


>AK027453-1|BAB55123.1|  228|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14547 fis, clone NT2RM2001637. ).
          Length = 228

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 35/85 (41%), Positives = 51/85 (60%)
 Frame = +2

Query: 203 FTTNLNKLKSMMDHLKAEDFAFDNSLNDIETWRQPLKAPCTYIKVFEDYQINMSIFVLKP 382
           F  NL+KLKS++  L+AED         ++    P   P TY+ ++E    ++ +F+LK 
Sbjct: 5   FPENLSKLKSLLTQLRAEDLNIAPRKATLQPL-PPNLPPVTYMHIYETDGFSLGVFLLKS 63

Query: 383 GFRMPLHDHPRMHGLLKVITGAVNI 457
           G  +PLHDHP MHG+LKV+ G V I
Sbjct: 64  GTSIPLHDHPGMHGMLKVLYGTVRI 88


>BC027589-1|AAH27589.1|  411|Homo sapiens LRRC6 protein protein.
          Length = 411

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
 Frame = +2

Query: 179 FDDNFKMDFTTNLNKLKSMMDHLKAEDFA------FDNSLNDIETWRQP 307
           FD  +  D    L+ L+S  DHL+A D         DNS +D+E W +P
Sbjct: 206 FDGRWYTDINATLSSLESK-DHLQAPDIEEHNTKKLDNSEDDLEFWNKP 253


>BC050653-1|AAH50653.1|  213|Homo sapiens NICN1 protein protein.
          Length = 213

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +3

Query: 30  EYFRLFXSEIXFCVXIQADFXWILRMKPSQPWKLLTYRLLYQYTGTQCAPLMTISKWISR 209
           EY  LF  ++   +   ++   ILR +PS  W   T   L  Y     +P +T  KW+S 
Sbjct: 95  EYVSLFKHQMLCDMARISELRLILR-QPSPLWLSFTVEELQIYQQGPKSPSVTFPKWLSH 153

Query: 210 P 212
           P
Sbjct: 154 P 154


>BC047286-1|AAH47286.1|  466|Homo sapiens leucine rich repeat
           containing 6 protein.
          Length = 466

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
 Frame = +2

Query: 179 FDDNFKMDFTTNLNKLKSMMDHLKAEDFA------FDNSLNDIETWRQP 307
           FD  +  D    L+ L+S  DHL+A D         DNS +D+E W +P
Sbjct: 206 FDGRWYTDINATLSSLESK-DHLQAPDTEEHNTKKLDNSEDDLEFWNKP 253


>BC005050-1|AAH05050.1|  213|Homo sapiens NICN1 protein protein.
          Length = 213

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +3

Query: 30  EYFRLFXSEIXFCVXIQADFXWILRMKPSQPWKLLTYRLLYQYTGTQCAPLMTISKWISR 209
           EY  LF  ++   +   ++   ILR +PS  W   T   L  Y     +P +T  KW+S 
Sbjct: 95  EYVSLFKHQMLCDMARISELRLILR-QPSPLWLSFTVEELQIYQQGPKSPSVTFPKWLSH 153

Query: 210 P 212
           P
Sbjct: 154 P 154


>AJ299740-1|CAC82516.1|  213|Homo sapiens nicolin 1 protein.
          Length = 213

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +3

Query: 30  EYFRLFXSEIXFCVXIQADFXWILRMKPSQPWKLLTYRLLYQYTGTQCAPLMTISKWISR 209
           EY  LF  ++   +   ++   ILR +PS  W   T   L  Y     +P +T  KW+S 
Sbjct: 95  EYVSLFKHQMLCDMARISELRLILR-QPSPLWLSFTVEELQIYQQGPKSPSVTFPKWLSH 153

Query: 210 P 212
           P
Sbjct: 154 P 154


>AF538150-1|AAN52734.1|  169|Homo sapiens NPCEDRGP protein.
          Length = 169

 Score = 30.3 bits (65), Expect = 4.9
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +3

Query: 30  EYFRLFXSEIXFCVXIQADFXWILRMKPSQPWKLLTYRLLYQYTGTQCAPLMTISKWISR 209
           EY  LF  ++   +   ++   ILR +PS  W   T   L  Y     +P +T  KW+S 
Sbjct: 93  EYVSLFKHQMLCDMARISELRLILR-QPSPLWLSFTVEELQIYQQGPKSPSVTFPKWLSH 151

Query: 210 P 212
           P
Sbjct: 152 P 152


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,165,614
Number of Sequences: 237096
Number of extensions: 1474312
Number of successful extensions: 3280
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3275
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)