Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13c09
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025722-3|AAN73848.1| 184|Caenorhabditis elegans Hypothetical ... 53 1e-07
Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 28 4.0
AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein. 28 4.0
AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein. 28 4.0
AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 28 4.0
Z47745-3|CAA87666.1| 313|Caenorhabditis elegans Hypothetical pr... 27 7.0
AL023844-7|CAA19533.1| 346|Caenorhabditis elegans Hypothetical ... 27 7.0
U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical pr... 27 9.3
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 27 9.3
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 27 9.3
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 27 9.3
>AC025722-3|AAN73848.1| 184|Caenorhabditis elegans Hypothetical
protein Y50D4C.6 protein.
Length = 184
Score = 53.2 bits (122), Expect = 1e-07
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +2
Query: 326 YIKVFEDYQINMSIF-VLKPGFRMPLHDHPRMHGLLKVITGAVNIRSFS 469
Y V++D +++ F +LK G ++PLHDHP H ++KV G+V IRSFS
Sbjct: 68 YADVYQDDYCHVNTFGLLKSGLKIPLHDHPNQHAVMKVYQGSVKIRSFS 116
>Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical
protein H15N14.1e protein.
Length = 893
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 258 ISHSIIASTISRHGGSRLKPHVRTLKCLKTIR*I*AFSC*NLVFEC 395
+SH+ I + RH +RL L+CL TI I +C L EC
Sbjct: 340 VSHADITTVARRHASNRLGHDTTILQCLNTICSI--LNC-TLTIEC 382
>Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical
protein H15N14.1d protein.
Length = 912
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 258 ISHSIIASTISRHGGSRLKPHVRTLKCLKTIR*I*AFSC*NLVFEC 395
+SH+ I + RH +RL L+CL TI I +C L EC
Sbjct: 340 VSHADITTVARRHASNRLGHDTTILQCLNTICSI--LNC-TLTIEC 382
>Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical
protein H15N14.1c protein.
Length = 964
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 258 ISHSIIASTISRHGGSRLKPHVRTLKCLKTIR*I*AFSC*NLVFEC 395
+SH+ I + RH +RL L+CL TI I +C L EC
Sbjct: 411 VSHADITTVARRHASNRLGHDTTILQCLNTICSI--LNC-TLTIEC 453
>AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein.
Length = 893
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 258 ISHSIIASTISRHGGSRLKPHVRTLKCLKTIR*I*AFSC*NLVFEC 395
+SH+ I + RH +RL L+CL TI I +C L EC
Sbjct: 340 VSHADITTVARRHASNRLGHDTTILQCLNTICSI--LNC-TLTIEC 382
>AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein.
Length = 912
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 258 ISHSIIASTISRHGGSRLKPHVRTLKCLKTIR*I*AFSC*NLVFEC 395
+SH+ I + RH +RL L+CL TI I +C L EC
Sbjct: 340 VSHADITTVARRHASNRLGHDTTILQCLNTICSI--LNC-TLTIEC 382
>AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein.
Length = 964
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 258 ISHSIIASTISRHGGSRLKPHVRTLKCLKTIR*I*AFSC*NLVFEC 395
+SH+ I + RH +RL L+CL TI I +C L EC
Sbjct: 411 VSHADITTVARRHASNRLGHDTTILQCLNTICSI--LNC-TLTIEC 453
>Z47745-3|CAA87666.1| 313|Caenorhabditis elegans Hypothetical
protein T19H5.4 protein.
Length = 313
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/58 (18%), Positives = 28/58 (48%)
Frame = -3
Query: 358 IYLIVFKHFNVRTWGFKRLPPCLDIVEAIIECEIFSFEVIHHRF*LI*VGREIHFEIV 185
IYL V+K N+ T+ + P +++ + C+ + ++ + R+ F+++
Sbjct: 114 IYLSVYKSLNLYTFAYSTFPKMMEVASSSSACQFDNLNNNNNELKPVRPKRDFRFKVI 171
>AL023844-7|CAA19533.1| 346|Caenorhabditis elegans Hypothetical
protein Y48A6B.9 protein.
Length = 346
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 492 TC-SVNGYSEKLRIFTAPVITFNSPCIRG 409
TC + G S+K FT + FN C+RG
Sbjct: 245 TCVTYGGMSKKAHEFTTSALVFNDICVRG 273
>U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical
protein ZC155.3 protein.
Length = 845
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +1
Query: 343 RLSDKYEHFRVKTWFSNASPRSPSYAWTIESDYWCSEYTEFL*VPINRTGE*LRPQGARE 522
+L +KY+H + +N++P S +I S CS + L V + E +
Sbjct: 557 KLPEKYDHILPQKRLTNSAPSSSDSQNSIRSASSCSSSSRLLNVAKIESHERIHSSTGGH 616
Query: 523 IRGSSFGT 546
G SF T
Sbjct: 617 RLGESFST 624
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +2
Query: 86 FXMDIKNETKPTME--------ITNIPPIVSIYRHAMRTFDDNFKMDFTTNLNKLKSMMD 241
F KN+ +P +E + N+P I+ +++ A++ F D+ + K+K +D
Sbjct: 454 FDAHTKNDMEPVLENLYSYKGTVQNVPDIIQVHKQAVQKFRDSEGRLSSAEAEKMKQRID 513
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +2
Query: 86 FXMDIKNETKPTME--------ITNIPPIVSIYRHAMRTFDDNFKMDFTTNLNKLKSMMD 241
F KN+ +P +E + N+P I+ +++ A++ F D+ + K+K +D
Sbjct: 456 FDAHTKNDMEPVLENLYSYKGTVQNVPDIIQVHKQAVQKFRDSEGRLSSAEAEKMKQRID 515
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +2
Query: 86 FXMDIKNETKPTME--------ITNIPPIVSIYRHAMRTFDDNFKMDFTTNLNKLKSMMD 241
F KN+ +P +E + N+P I+ +++ A++ F D+ + K+K +D
Sbjct: 482 FDAHTKNDMEPVLENLYSYKGTVQNVPDIIQVHKQAVQKFRDSEGRLSSAEAEKMKQRID 541
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,400,849
Number of Sequences: 27780
Number of extensions: 246700
Number of successful extensions: 642
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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