Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13c08
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009107-1|AAH09107.1| 879|Homo sapiens microtubule associated ... 35 0.21
AL160291-7|CAI16908.1| 878|Homo sapiens novel protein kinase do... 35 0.21
AL160291-6|CAI16909.1| 879|Homo sapiens novel protein kinase do... 35 0.21
AL160291-5|CAI16910.1| 840|Homo sapiens novel protein kinase do... 35 0.21
AK074804-1|BAC11218.1| 840|Homo sapiens protein ( Homo sapiens ... 35 0.21
AK027719-1|BAB55321.1| 878|Homo sapiens protein ( Homo sapiens ... 35 0.21
BC148207-1|AAI48208.1| 395|Homo sapiens Unknown (protein for IM... 33 0.85
BC069197-1|AAH69197.1| 643|Homo sapiens autocrine motility fact... 33 0.85
BC056869-1|AAH56869.1| 202|Homo sapiens AMFR protein protein. 33 0.85
BC017043-1|AAH17043.1| 292|Homo sapiens AMFR protein protein. 33 0.85
AF124145-1|AAD56722.1| 643|Homo sapiens autocrine motility fact... 31 2.6
X85137-1|CAA59449.1| 1057|Homo sapiens kinesin-related protein p... 31 4.5
U79304-1|AAB50228.1| 372|Homo sapiens unknown protein. 31 4.5
U37426-1|AAA86132.1| 1056|Homo sapiens kinesin-like spindle prot... 31 4.5
BC126211-1|AAI26212.1| 1056|Homo sapiens kinesin family member 1... 31 4.5
BC036453-1|AAH36453.1| 585|Homo sapiens family with sequence si... 31 4.5
AL360222-1|CAH72288.1| 1056|Homo sapiens kinesin family member 1... 31 4.5
AL356128-3|CAI13671.1| 1056|Homo sapiens kinesin family member 1... 31 4.5
AL355474-3|CAI15710.1| 599|Homo sapiens family with sequence si... 31 4.5
AL355474-2|CAI15709.1| 607|Homo sapiens family with sequence si... 31 4.5
AL355474-1|CAI15708.1| 372|Homo sapiens family with sequence si... 31 4.5
L34059-1|AAA35627.1| 916|Homo sapiens cadherin-4 protein. 30 7.9
BC113387-1|AAI13388.1| 248|Homo sapiens family with sequence si... 30 7.9
BC113385-1|AAI13386.1| 248|Homo sapiens family with sequence si... 30 7.9
AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein. 30 7.9
AL009173-2|CAI42611.1| 248|Homo sapiens novel protein protein. 30 7.9
AK094978-1|BAC04467.1| 248|Homo sapiens protein ( Homo sapiens ... 30 7.9
AF314185-1|AAL76164.1| 283|Homo sapiens SR rich protein protein. 30 7.9
AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein. 30 7.9
>BC009107-1|AAH09107.1| 879|Homo sapiens microtubule associated
serine/threonine kinase-like protein.
Length = 879
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 395 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 532
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>AL160291-7|CAI16908.1| 878|Homo sapiens novel protein kinase
domain containing protein protein.
Length = 878
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 395 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 532
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>AL160291-6|CAI16909.1| 879|Homo sapiens novel protein kinase
domain containing protein protein.
Length = 879
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 395 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 532
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>AL160291-5|CAI16910.1| 840|Homo sapiens novel protein kinase
domain containing protein protein.
Length = 840
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 395 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 532
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>AK074804-1|BAC11218.1| 840|Homo sapiens protein ( Homo sapiens
cDNA FLJ90323 fis, clone NT2RP2001769, weakly similar to
SERINE/THREONINE-PROTEIN KINASE ORB6 (EC 2.7.1.-). ).
Length = 840
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 395 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 532
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>AK027719-1|BAB55321.1| 878|Homo sapiens protein ( Homo sapiens
cDNA FLJ14813 fis, clone NT2RP4002408, moderately
similar to PROTEIN KINASE CEK1 (EC 2.7.1.-). ).
Length = 878
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +2
Query: 395 DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDR 532
DK QTP K+ I+ +CE DE +K +S L SD+DR
Sbjct: 515 DKQQTPEKLPIPMIAKNLMCELDEDCEKNSKRDYLSSSFLCSDDDR 560
>BC148207-1|AAI48208.1| 395|Homo sapiens Unknown (protein for
IMAGE:40112974) protein.
Length = 395
Score = 33.1 bits (72), Expect = 0.85
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 173 KKIIDKYNRDDAVQTKYLPDRGDSSDK-REKSRILDLAERKRIRERYT 313
K+ ++K + DDA +LP G SSD + R+L A +R++++ T
Sbjct: 347 KRFLNKSSEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQT 394
>BC069197-1|AAH69197.1| 643|Homo sapiens autocrine motility factor
receptor protein.
Length = 643
Score = 33.1 bits (72), Expect = 0.85
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 173 KKIIDKYNRDDAVQTKYLPDRGDSSDK-REKSRILDLAERKRIRERYT 313
K+ ++K + DDA +LP G SSD + R+L A +R++++ T
Sbjct: 595 KRFLNKSSEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQT 642
>BC056869-1|AAH56869.1| 202|Homo sapiens AMFR protein protein.
Length = 202
Score = 33.1 bits (72), Expect = 0.85
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 173 KKIIDKYNRDDAVQTKYLPDRGDSSDK-REKSRILDLAERKRIRERYT 313
K+ ++K + DDA +LP G SSD + R+L A +R++++ T
Sbjct: 154 KRFLNKSSEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQT 201
>BC017043-1|AAH17043.1| 292|Homo sapiens AMFR protein protein.
Length = 292
Score = 33.1 bits (72), Expect = 0.85
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 173 KKIIDKYNRDDAVQTKYLPDRGDSSDK-REKSRILDLAERKRIRERYT 313
K+ ++K + DDA +LP G SSD + R+L A +R++++ T
Sbjct: 244 KRFLNKSSEDDAASESFLPSEGASSDPVTLRRRMLAAAAERRLQKQQT 291
>AF124145-1|AAD56722.1| 643|Homo sapiens autocrine motility factor
receptor protein.
Length = 643
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 173 KKIIDKYNRDDAVQTKYLPDRGDSSDK-REKSRILDLAERKRIRERYT 313
K+ ++K + DDA +LP G SSD + R+L A +R++++ T
Sbjct: 595 KRFLNKSSEDDAASESFLPLEGASSDPVTLRRRMLAAAAERRLQKQQT 642
>X85137-1|CAA59449.1| 1057|Homo sapiens kinesin-related protein
protein.
Length = 1057
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 296 IRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID 424
++E Y T L++ ++ ++ + SK ++T E+TTKD S SK+D
Sbjct: 476 VKEEYITSALESTEEKLHDAA-SKLLNTVEETTKDVSGLHSKLD 518
>U79304-1|AAB50228.1| 372|Homo sapiens unknown protein.
Length = 372
Score = 30.7 bits (66), Expect = 4.5
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +2
Query: 137 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRIL-DLAE-RKRIRERY 310
T T+ + K+ I K+ + KY P GD + E + + DLA+ RK+++E
Sbjct: 199 TITQLTKHIQSLKRKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKE-- 256
Query: 311 TIRLKAADQNVNTSVGSKTISTCEDTT 391
++LK +++ + G CE T
Sbjct: 257 -LKLKLSEEQGSAPKGPPRNLLCEQPT 282
>U37426-1|AAA86132.1| 1056|Homo sapiens kinesin-like spindle protein
HKSP protein.
Length = 1056
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 296 IRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID 424
++E Y T L++ ++ ++ + SK ++T E+TTKD S SK+D
Sbjct: 476 VKEEYITSALESTEEKLHDAA-SKLLNTVEETTKDVSGLHSKLD 518
>BC126211-1|AAI26212.1| 1056|Homo sapiens kinesin family member 11
protein.
Length = 1056
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 296 IRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID 424
++E Y T L++ ++ ++ + SK ++T E+TTKD S SK+D
Sbjct: 476 VKEEYITSALESTEEKLHDAA-SKLLNTVEETTKDVSGLHSKLD 518
>BC036453-1|AAH36453.1| 585|Homo sapiens family with sequence
similarity 13, member C1 protein.
Length = 585
Score = 30.7 bits (66), Expect = 4.5
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +2
Query: 137 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRIL-DLAE-RKRIRERY 310
T T+ + K+ I K+ + KY P GD + E + + DLA+ RK+++E
Sbjct: 285 TITQLTKHIQSLKRKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKE-- 342
Query: 311 TIRLKAADQNVNTSVGSKTISTCEDTT 391
++LK +++ + G CE T
Sbjct: 343 -LKLKLSEEQGSAPKGPPRNLLCEQPT 368
>AL360222-1|CAH72288.1| 1056|Homo sapiens kinesin family member 11
protein.
Length = 1056
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 296 IRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID 424
++E Y T L++ ++ ++ + SK ++T E+TTKD S SK+D
Sbjct: 476 VKEEYITSALESTEEKLHDAA-SKLLNTVEETTKDVSGLHSKLD 518
>AL356128-3|CAI13671.1| 1056|Homo sapiens kinesin family member 11
protein.
Length = 1056
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 296 IRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID 424
++E Y T L++ ++ ++ + SK ++T E+TTKD S SK+D
Sbjct: 476 VKEEYITSALESTEEKLHDAA-SKLLNTVEETTKDVSGLHSKLD 518
>AL355474-3|CAI15710.1| 599|Homo sapiens family with sequence
similarity 13, member C1 protein.
Length = 599
Score = 30.7 bits (66), Expect = 4.5
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +2
Query: 137 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRIL-DLAE-RKRIRERY 310
T T+ + K+ I K+ + KY P GD + E + + DLA+ RK+++E
Sbjct: 299 TITQLTKHIQSLKRKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKE-- 356
Query: 311 TIRLKAADQNVNTSVGSKTISTCEDTT 391
++LK +++ + G CE T
Sbjct: 357 -LKLKLSEEQGSAPKGPPRNLLCEQPT 382
>AL355474-2|CAI15709.1| 607|Homo sapiens family with sequence
similarity 13, member C1 protein.
Length = 607
Score = 30.7 bits (66), Expect = 4.5
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +2
Query: 137 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRIL-DLAE-RKRIRERY 310
T T+ + K+ I K+ + KY P GD + E + + DLA+ RK+++E
Sbjct: 307 TITQLTKHIQSLKRKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKE-- 364
Query: 311 TIRLKAADQNVNTSVGSKTISTCEDTT 391
++LK +++ + G CE T
Sbjct: 365 -LKLKLSEEQGSAPKGPPRNLLCEQPT 390
>AL355474-1|CAI15708.1| 372|Homo sapiens family with sequence
similarity 13, member C1 protein.
Length = 372
Score = 30.7 bits (66), Expect = 4.5
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +2
Query: 137 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRIL-DLAE-RKRIRERY 310
T T+ + K+ I K+ + KY P GD + E + + DLA+ RK+++E
Sbjct: 199 TITQLTKHIQSLKRKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKWMNDLAKGRKQLKE-- 256
Query: 311 TIRLKAADQNVNTSVGSKTISTCEDTT 391
++LK +++ + G CE T
Sbjct: 257 -LKLKLSEEQGSAPKGPPRNLLCEQPT 282
>L34059-1|AAA35627.1| 916|Homo sapiens cadherin-4 protein.
Length = 916
Score = 29.9 bits (64), Expect = 7.9
Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 5/128 (3%)
Frame = +2
Query: 92 NTYINHLIDMSTRNNT--KTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKS 265
N N +D ++ T T +N++ D+ QT P + + E
Sbjct: 279 NQVYNCSVDEGSKPGTYVMTITANDADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETG 338
Query: 266 RILDLA---ERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESI 436
I+ +A +R+++++ YT+ ++A D N + G +T T D + PS+ T S
Sbjct: 339 DIVTVAAGWDREKVQQ-YTVIVQATDMEGNLNYGLSNTATAIITVTDVNDNPSEF-TAST 396
Query: 437 SAKGLCEN 460
A + EN
Sbjct: 397 FAGEVPEN 404
>BC113387-1|AAI13388.1| 248|Homo sapiens family with sequence
similarity 133, member A protein.
Length = 248
Score = 29.9 bits (64), Expect = 7.9
Identities = 22/106 (20%), Positives = 45/106 (42%)
Frame = +2
Query: 128 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER 307
++ K NES K+ K + + ++ DSS S + + KR +++
Sbjct: 75 KSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKK 134
Query: 308 YTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAK 445
K++ + + S S++ + + K K +T + D S+S K
Sbjct: 135 KNRSYKSSQSSTHES-ESESKESVKKKKKSKDETEKEKDVRSLSKK 179
>BC113385-1|AAI13386.1| 248|Homo sapiens family with sequence
similarity 133, member A protein.
Length = 248
Score = 29.9 bits (64), Expect = 7.9
Identities = 22/106 (20%), Positives = 45/106 (42%)
Frame = +2
Query: 128 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER 307
++ K NES K+ K + + ++ DSS S + + KR +++
Sbjct: 75 KSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKK 134
Query: 308 YTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAK 445
K++ + + S S++ + + K K +T + D S+S K
Sbjct: 135 KNRSYKSSQSSTHES-ESESKESVKKKKKSKDETEKEKDVRSLSKK 179
>AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein.
Length = 805
Score = 29.9 bits (64), Expect = 7.9
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Frame = +2
Query: 122 STRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIR 301
S T + S D +KI D+ K+ + + K+E+SR +D +K+ +
Sbjct: 623 SRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDK 682
Query: 302 ERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID-TESISAKGLCENDESIKK 478
ER + K ++ K S+ +D K K ++ + SIS K + + K
Sbjct: 683 EREREQDKRKEKQKREEKDFK-FSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSK 741
Query: 479 GRSVK 493
+ K
Sbjct: 742 KSTTK 746
>AL009173-2|CAI42611.1| 248|Homo sapiens novel protein protein.
Length = 248
Score = 29.9 bits (64), Expect = 7.9
Identities = 22/106 (20%), Positives = 45/106 (42%)
Frame = +2
Query: 128 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER 307
++ K NES K+ K + + ++ DSS S + + KR +++
Sbjct: 75 KSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKK 134
Query: 308 YTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAK 445
K++ + + S S++ + + K K +T + D S+S K
Sbjct: 135 KNRSYKSSQSSTHES-ESESKESVKKKKKSKDETEKEKDVRSLSKK 179
>AK094978-1|BAC04467.1| 248|Homo sapiens protein ( Homo sapiens
cDNA FLJ37659 fis, clone BRHIP2010610, weakly similar to
GAR2 PROTEIN. ).
Length = 248
Score = 29.9 bits (64), Expect = 7.9
Identities = 22/106 (20%), Positives = 45/106 (42%)
Frame = +2
Query: 128 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER 307
++ K NES K+ K + + ++ DSS S + + KR +++
Sbjct: 75 KSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKK 134
Query: 308 YTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAK 445
K++ + + S S++ + + K K +T + D S+S K
Sbjct: 135 KNRSYKSSQSSTHES-ESESKESVKKKKKSKDETEKEKDVRSLSKK 179
>AF314185-1|AAL76164.1| 283|Homo sapiens SR rich protein protein.
Length = 283
Score = 29.9 bits (64), Expect = 7.9
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Frame = +2
Query: 122 STRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIR 301
S T + S D +KI D+ K+ + + K+E+SR +D +K+ +
Sbjct: 101 SRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDK 160
Query: 302 ERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID-TESISAKGLCENDESIKK 478
ER + K ++ K S+ +D K K ++ + SIS K + + K
Sbjct: 161 EREREQDKRKEKQKREEKDFK-FSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSK 219
Query: 479 GRSVK 493
+ K
Sbjct: 220 KSTTK 224
>AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein.
Length = 805
Score = 29.9 bits (64), Expect = 7.9
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Frame = +2
Query: 122 STRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIR 301
S T + S D +KI D+ K+ + + K+E+SR +D +K+ +
Sbjct: 623 SRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDK 682
Query: 302 ERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID-TESISAKGLCENDESIKK 478
ER + K ++ K S+ +D K K ++ + SIS K + + K
Sbjct: 683 EREREQDKRKEKQKREEKDFK-FSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSK 741
Query: 479 GRSVK 493
+ K
Sbjct: 742 KSTTK 746
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,405,523
Number of Sequences: 237096
Number of extensions: 1283965
Number of successful extensions: 3779
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3779
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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