Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13c08
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032641-3|CAA21648.1| 200|Caenorhabditis elegans Hypothetical ... 34 0.098
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 33 0.13
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 33 0.17
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 32 0.40
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.69
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.69
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.69
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.91
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.91
Z82052-6|CAB04829.4| 327|Caenorhabditis elegans Hypothetical pr... 30 1.2
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 30 1.2
L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 30 1.6
AF016657-8|AAB93650.2| 275|Caenorhabditis elegans Hypothetical ... 29 2.8
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 29 2.8
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.7
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 29 3.7
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical pr... 28 4.9
AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin bet... 28 4.9
AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical ... 28 4.9
AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical ... 28 4.9
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 28 4.9
U28929-4|AAA68347.3| 338|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 28 6.4
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z68318-1|CAA92691.1| 285|Caenorhabditis elegans Hypothetical pr... 27 8.5
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 27 8.5
AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical ... 27 8.5
>AL032641-3|CAA21648.1| 200|Caenorhabditis elegans Hypothetical
protein Y5F2A.3 protein.
Length = 200
Score = 33.9 bits (74), Expect = 0.098
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 344 NTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGR 484
NT + T++ ED +K+KS++ S +S ++K LC D + +K +
Sbjct: 17 NTVRKNSTMNPAEDGSKEKSKSKSNESKDSKNSKNLCTKDATFEKAK 63
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 137 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSS---DKREKSRILDLAERKRIRER 307
T TE S G KKIID+ D ++ + D +KR + + + + + KR+RE
Sbjct: 1057 TATEASLNDGSDKKIIDEAQPTDEIRRAQPTNEMDKEMEFEKRIREQRIQMEQAKRLREE 1116
Query: 308 YTIRLKAADQNVNTSVGSKTI 370
+ + +Q + ++ I
Sbjct: 1117 ELLEKQLQEQEIEEKARNEMI 1137
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 149 KSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKS-RILDLAERKRIRERYTIRLK 325
+++ D K+ +D++ R + + + G+S EKS R + E+KR +ER R +
Sbjct: 831 EADRDPDAKRKVDEFRRCEMEKVEKALRSGESKKSDEKSERKSEKKEKKRDKERKRSRSR 890
Query: 326 AADQNVNTSVGSKTISTCEDTTKDKSQ 406
+ D++ + S ++ D +D+ +
Sbjct: 891 SRDRDRDRSRRDRSRDRSRDRDRDRDR 917
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 116 DMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKR 295
D R + + + S D + D+ NRD + R + ++RE+ R + AE++R
Sbjct: 340 DAGRRGSRRDRSRDRSRDRDRDRDRDNRDRYFEKSANSRREEEQNRREQQRERERAEQER 399
Query: 296 IRER 307
RER
Sbjct: 400 RRER 403
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.1 bits (67), Expect = 0.69
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Frame = +2
Query: 140 KTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIR 319
KTEKS+ S K K + A Q+ + +DK K + D E++++ +
Sbjct: 9992 KTEKSDSSISQKSDTAKTVAESAGQSDSETQKVSEADKAHKQKESD--EKQKLESEIAAK 10049
Query: 320 LKAADQNVNTSVGSKTISTCEDTT--KDKSQTPSKIDTESISAKGLCENDESIKKGRSVK 493
K+A+Q +KT ED + K K Q K +S + + + ++ + K
Sbjct: 10050 -KSAEQKSKLETEAKTKKVIEDESAKKQKEQEDKKKGDDSAKKQKDQKEKQKLESEATSK 10108
Query: 494 VP 499
P
Sbjct: 10109 KP 10110
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 0.69
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Frame = +2
Query: 140 KTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIR 319
KTEKS+ S K K + A Q+ + +DK K + D E++++ +
Sbjct: 10012 KTEKSDSSISQKSDTAKTVAESAGQSDSETQKVSEADKAHKQKESD--EKQKLESEIAAK 10069
Query: 320 LKAADQNVNTSVGSKTISTCEDTT--KDKSQTPSKIDTESISAKGLCENDESIKKGRSVK 493
K+A+Q +KT ED + K K Q K +S + + + ++ + K
Sbjct: 10070 -KSAEQKSKLETEAKTKKVIEDESAKKQKEQEDKKKGDDSAKKQKDQKEKQKLESEATSK 10128
Query: 494 VP 499
P
Sbjct: 10129 KP 10130
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 0.69
Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Frame = +2
Query: 140 KTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIR 319
KTEKS+ S K K + A Q+ + +DK K + D E++++ +
Sbjct: 10012 KTEKSDSSISQKSDTAKTVAESAGQSDSETQKVSEADKAHKQKESD--EKQKLESEIAAK 10069
Query: 320 LKAADQNVNTSVGSKTISTCEDTT--KDKSQTPSKIDTESISAKGLCENDESIKKGRSVK 493
K+A+Q +KT ED + K K Q K +S + + + ++ + K
Sbjct: 10070 -KSAEQKSKLETEAKTKKVIEDESAKKQKEQEDKKKGDDSAKKQKDQKEKQKLESEATSK 10128
Query: 494 VP 499
P
Sbjct: 10129 KP 10130
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 30.7 bits (66), Expect = 0.91
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +2
Query: 134 NTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYT 313
++KT+ D ++ + K D + + L +R DS +K SRI +L R RER
Sbjct: 983 SSKTQFEAMFADVQQTLSKEINDKTEEIERLMERIDSLEKVNHSRIEELESRLTQRERVV 1042
Query: 314 IRLKA 328
L+A
Sbjct: 1043 ESLEA 1047
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 30.7 bits (66), Expect = 0.91
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +2
Query: 134 NTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYT 313
++KT+ D ++ + K D + + L +R DS +K SRI +L R RER
Sbjct: 985 SSKTQFEAMFADVQQTLSKEINDKTEEIERLMERIDSLEKVNHSRIEELESRLTQRERVV 1044
Query: 314 IRLKA 328
L+A
Sbjct: 1045 ESLEA 1049
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 30.7 bits (66), Expect = 0.91
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +2
Query: 134 NTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYT 313
++KT+ D ++ + K D + + L +R DS +K SRI +L R RER
Sbjct: 985 SSKTQFEAMFADVQQTLSKEINDKTEEIERLMERIDSLEKVNHSRIEELESRLTQRERVV 1044
Query: 314 IRLKA 328
L+A
Sbjct: 1045 ESLEA 1049
>Z82052-6|CAB04829.4| 327|Caenorhabditis elegans Hypothetical
protein T25E12.11 protein.
Length = 327
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -3
Query: 591 WILPFCGFRLMNLTTLYILVRSLSDISVLV--IGTLTDLPFFIDSSF 457
W FC ++ +T + +L SLSD +LV IG L FF+ S F
Sbjct: 62 WSYWFCSTAVLMITLMMLLYASLSDNYILVKKIGILIMFIFFMTSIF 108
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/95 (23%), Positives = 43/95 (45%)
Frame = +2
Query: 140 KTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIR 319
K+E ++GD+ + + +V T + ++ S++ EK +D E++ T R
Sbjct: 266 KSETEEKNGDSSTKSPEVTSESSVDTTTIEEQLKSNNDEEKQ--VDGNEKES-----TFR 318
Query: 320 LKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKID 424
+ D N N +G T E+TT ++ +D
Sbjct: 319 VLNEDHNENEEIGEGTKKVTEETTTVETTERQNVD 353
>L23648-8|AAA28030.1| 503|Caenorhabditis elegans Hypothetical
protein F44B9.2 protein.
Length = 503
Score = 30.3 bits (65), Expect = 1.2
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 8/142 (5%)
Frame = +2
Query: 116 DMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKR 295
++ + N EK NE D ++ + D + D S D E R + A R+
Sbjct: 115 EVEAKQNVIVEKENEIKDQQQNDQLSAKLDPKTPNSVDDNSMSFDISECERKFNTAIREA 174
Query: 296 --IRERYTIRLKAADQNVN------TSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGL 451
I E + + K +N + + + T +D SQ P + + + GL
Sbjct: 175 NDILEDFDKKSKQVAENTKFVAKELAELAADAPRVFQKTIEDHSQVP---EISELPSGGL 231
Query: 452 CENDESIKKGRSVKVPITSTLI 517
+N ES+ G + IT TL+
Sbjct: 232 PKNVESVLIGEGILEEITGTLV 253
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +2
Query: 128 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILD-LAERKRIRE 304
+ KT + NE+ +K +K + K + + + +REK++ D L E R +E
Sbjct: 78 KEKEKTHEKNEADKEEKEAEKEEEKEEKPPKEVTEEKEKEKEREKTKTKDELEEAPREKE 137
Query: 305 RYTIRLKAADQNVNTSVGSKTISTCEDTTKDKS-QTPSKIDTESI 436
+ K+ D++ + + + K+K + ++ TE I
Sbjct: 138 TMEKKQKSKDEDEGDLSKEEILKIKKALKKEKKLRDRERLKTEKI 182
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Frame = +2
Query: 146 EKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILD----LAERKRIRERYT 313
EK E TK +++ R+ K + + K IL L + K++R+R
Sbjct: 117 EKEREKTKTKDELEEAPREKETMEKKQKSKDEDEGDLSKEEILKIKKALKKEKKLRDRER 176
Query: 314 IRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDT-ESISAK 445
++ + D++ T + + E ++ K++ + + T S SAK
Sbjct: 177 LKTEKIDKSTETKNSTTPSTEKEKSSMKKTKKEAAVATGTSGSAK 221
>AF016657-8|AAB93650.2| 275|Caenorhabditis elegans Hypothetical
protein C16C4.3 protein.
Length = 275
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 452 CENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINR 568
CE +ES + ++ V +T TL+S N R F N+
Sbjct: 187 CEKEESNTRNWTIAVELTLTLVSANGRILTSSTTSFFNK 225
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Frame = +2
Query: 122 STRNNTKTEKSNE-SGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAER--- 289
S R +++ +S SGD ++ RDD + K RGD D++++SR D E
Sbjct: 426 SDRTSSRRHRSRSASGDRRR-----KRDDREREKRRERRGDDEDRKKRSRRGDEEEESSS 480
Query: 290 -KRIRERYTIRLKAADQNVNTSV 355
++ R+ + R + D+ +T V
Sbjct: 481 GRKERKEKSSRSRHEDEESSTGV 503
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 28.7 bits (61), Expect = 3.7
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +2
Query: 329 ADQNVNTSVGSKTISTCEDTTK--DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPI 502
AD N S + I+ C +TK ++S P ES A ++ +K+GRSVK P
Sbjct: 224 ADVNGLGSPSANRITGCPPSTKVSNQSSPPEPAVNESEEA-----DEPVLKRGRSVKQPK 278
Query: 503 TSTLISDNDRTRIYKVVRFINRKPQKGSI 589
+ D D + + +P K +I
Sbjct: 279 DESESDDEDAEKAPAAIPKKRGRPGKSAI 307
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 28.7 bits (61), Expect = 3.7
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +2
Query: 329 ADQNVNTSVGSKTISTCEDTTK--DKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPI 502
AD N S + I+ C +TK ++S P ES A ++ +K+GRSVK P
Sbjct: 224 ADVNGLGSPSANRITGCPPSTKVSNQSSPPEPAVNESEEA-----DEPVLKRGRSVKQPK 278
Query: 503 TSTLISDNDRTRIYKVVRFINRKPQKGSI 589
+ D D + + +P K +I
Sbjct: 279 DESESDDEDAEKAPAAIPKKRGRPGKSAI 307
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 1/92 (1%)
Frame = +2
Query: 116 DMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSR-ILDLAERK 292
D + K N G +++ K +RDD DR D RE+ R + R
Sbjct: 394 DRERERERRRSKRNRQGGSQRSSSKKHRDDRRDRDRERDRNDRDRNREREREERERENRD 453
Query: 293 RIRERYTIRLKAADQNVNTSVGSKTISTCEDT 388
R R +A + TS S I+ ++
Sbjct: 454 NERGRRERESEAPRRRKETSTTSNPINVLNES 485
>Z81142-8|CAO82053.1| 370|Caenorhabditis elegans Hypothetical
protein ZK1037.13 protein.
Length = 370
Score = 28.3 bits (60), Expect = 4.9
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 101 INHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDS-SDKREKSRILD 277
INH S R+ + +K G K I +RD Q P + DS S K + +LD
Sbjct: 87 INHESKNSCRS-CRLQKCLNVGMNPKAIQ--HRDPIGQRS--PPKDDSDSQKSDLQFLLD 141
Query: 278 LAERKRIR-ERYTIRLK 325
L +++RIR ++Y I+LK
Sbjct: 142 LQKKQRIRNQKYGIQLK 158
>AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin beta
1B protein.
Length = 742
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 326 AADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESI---SAKGLCE 457
+AD +V S SK +S C T + S IDT+++ S K CE
Sbjct: 538 SADLSVPVSTASKRLSACGSDTNLDAIGSSSIDTKTVEWDSVKEACE 584
>AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical
protein Y59H11AR.2b protein.
Length = 1111
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 428 ESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKV 550
+++ G C +ES+ G S+ PIT + ISD+ +I+ +
Sbjct: 296 DAVLLNGTCIVNESMLTGESI--PITKSAISDDGHEKIFSI 334
>AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical
protein Y59H11AR.2a protein.
Length = 1127
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 428 ESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKV 550
+++ G C +ES+ G S+ PIT + ISD+ +I+ +
Sbjct: 312 DAVLLNGTCIVNESMLTGESI--PITKSAISDDGHEKIFSI 350
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 128 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERK 292
++ K EK E + K+ DK +D+ + K D+ D DK++K D E+K
Sbjct: 193 KDKKKDEKKEEKKEKKE--DK-KKDEKKKDKKKEDKKDKKDKKDKKDKKDKKEKK 244
>U28929-4|AAA68347.3| 338|Caenorhabditis elegans Hypothetical
protein F09C12.6 protein.
Length = 338
Score = 27.9 bits (59), Expect = 6.4
Identities = 24/99 (24%), Positives = 43/99 (43%)
Frame = -3
Query: 594 IWILPFCGFRLMNLTTLYILVRSLSDISVLVIGTLTDLPFFIDSSFSQSPFAEIDSVSIL 415
I+I G+ L ++++ S I+ LV + ++ + + SF VSI
Sbjct: 197 IYICNISGYLFSFLINCITMIKASSTINKLVRRQIINVRYSLVISFISFVL-----VSIP 251
Query: 414 LGVWLLSFVVSSQVDIVLDPTLVLTFWSAAFNLMVYLSL 298
+ +LS V + P+ T ++ N+ VYLSL
Sbjct: 252 NAISILSVHFEEVVSFISKPSTYFTCVNSGINIFVYLSL 290
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/94 (23%), Positives = 42/94 (44%)
Frame = +2
Query: 212 QTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTT 391
+ K + + KRE+ +++ AERKRI E R + A+ + + E+ +
Sbjct: 893 EEKRKEEEAEEERKREEEKLI--AERKRIEEVEEQRKREAEDKEKIEQLNAKVREKEERS 950
Query: 392 KDKSQTPSKIDTESISAKGLCENDESIKKGRSVK 493
+ + + K D E K L E E ++ + +K
Sbjct: 951 EARRKQKEKDDEEE---KRLYEEKEKEQRKKQIK 981
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/51 (27%), Positives = 20/51 (39%)
Frame = +2
Query: 116 DMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSR 268
D + K N G +++ K +RDD DR D RE+ R
Sbjct: 394 DRERERERRRSKRNRQGGSQRSSSKKHRDDRRDRDRERDRNDRDRNRERER 444
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/51 (27%), Positives = 20/51 (39%)
Frame = +2
Query: 116 DMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSR 268
D + K N G +++ K +RDD DR D RE+ R
Sbjct: 388 DRERERERRRSKRNRQGGSQRSSSKKHRDDRRDRDRERDRNDRDRNRERER 438
>Z68318-1|CAA92691.1| 285|Caenorhabditis elegans Hypothetical
protein T21B10.1 protein.
Length = 285
Score = 27.5 bits (58), Expect = 8.5
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 245 SDKREKSRILDLAERKRIRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKI 421
S ++E + L L E++ +R+ +IR + + Q V S S T D T S+I
Sbjct: 23 SGEKEAVKQLTLEEQESLRKTLPSIRARESTQ-VTASADSVT------EFDDDLLTMSRI 75
Query: 422 DTESISAKGLCENDESIKKGRSVK 493
DT++I A+G + ++ G VK
Sbjct: 76 DTDAIRARGFLKYTQNYVPGVDVK 99
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.5
Identities = 24/119 (20%), Positives = 49/119 (41%)
Frame = +2
Query: 116 DMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKR 295
D ++ K K + S + + DD + K + DSSD + S D ++
Sbjct: 95 DKKSKKKKKKSKKDSSDSSDSSDSSDSSDDGKKKKKKKSKKDSSD--DSSDSSDSSDSSD 152
Query: 296 IRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESI 472
+ + K + ++ N S + + +D++ D + P K +S K ++DE +
Sbjct: 153 SSDDDKKKKKKSKKSKNKGSSSDSSDSSDDSSDD--EKPKKKKKKSKKPKKAPKSDEEV 209
>AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical
protein F42G8.8 protein.
Length = 487
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 341 VNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVP--ITSTL 514
++ +V + I+ +D K ++ ++SA + S KG++ K+P IT L
Sbjct: 327 LHPNVAADEITRGDDMPSGAKVAKKKSNSMTVSASKSSSSSNSHGKGKNKKMPALITDIL 386
Query: 515 ISDNDR 532
IS +DR
Sbjct: 387 ISMDDR 392
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,356,512
Number of Sequences: 27780
Number of extensions: 231904
Number of successful extensions: 1013
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -