BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13c02
(692 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 26 0.98
DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor... 25 2.3
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 25 2.3
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 25 3.0
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 23 9.1
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 26.2 bits (55), Expect = 0.98
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 87 PVQWIEKIVYNETDPDNSIISIA 19
P+QW++K++ P N+I S++
Sbjct: 452 PLQWLDKVLMQMGSPHNAISSVS 474
>DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor 22
protein.
Length = 467
Score = 25.0 bits (52), Expect = 2.3
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = -3
Query: 618 IHNFVKVQRNRYLRVIVSVPVKVNINKLAILVP*LGYAEGSRVNSSIISCFTNACTEFLF 439
I+ F+ R+ VI NI ++I+VP S N S ++ F N T+F +
Sbjct: 131 INKFISTSDKRFDEVIY------NIIFMSIMVPHFLLPVASWRNGSEVAKFKNMWTDFQY 184
Query: 438 KRVPVT 421
K + VT
Sbjct: 185 KYLIVT 190
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 25.0 bits (52), Expect = 2.3
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 504 RRNPTTGPKWPTC 542
RR+P +G +WP+C
Sbjct: 259 RRSPRSGGRWPSC 271
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 24.6 bits (51), Expect = 3.0
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 361 GQRATFFFINAAPQWQPFNAGNWNSLEQKLRAR 459
G+ F + A FN NW S+ +L+A+
Sbjct: 618 GRDNRFLLVVALDVKNAFNTANWQSIASRLQAK 650
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 23.0 bits (47), Expect = 9.1
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 54 RYKQFFLSIVLVML*PEPPGGFICVVRAESPQC 152
RY Q+F ++ ++ F+ +R ESP C
Sbjct: 224 RYIQYFSGLLSGVIKLNSSSFFLKAIRVESPPC 256
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,219
Number of Sequences: 2352
Number of extensions: 18597
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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