Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13c02
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   3.6  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   3.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   8.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.4  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 382 FINAAPQWQP 411
           F+NAAP W P
Sbjct: 22  FVNAAPDWVP 31


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 382 FINAAPQWQP 411
           F+NAAP W P
Sbjct: 22  FVNAAPDWVP 31


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 602 FTKLCMSLSYKRAQ 643
           FT+LCM L +K A+
Sbjct: 212 FTELCMKLGWKSAR 225


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 192 WRFFPWG 212
           WRF PWG
Sbjct: 553 WRFQPWG 559


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +2

Query: 272 VQNLLANTLQIHNIWPVATSPRKLTS 349
           + N   N   IHN +PV T  R LTS
Sbjct: 576 IHNAQVNKRSIHNNYPVHTFGR-LTS 600


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,457
Number of Sequences: 438
Number of extensions: 5582
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)