Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13b18
(704 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 34 0.096
03_04_0151 - 17729023-17729372,17729441-17730623,17730723-177309... 32 0.51
06_02_0013 - 10581449-10585105 31 0.67
05_03_0459 - 14284513-14286336 31 0.89
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 31 0.89
07_03_1182 - 24610862-24611637,24612223-24612340,24612441-246141... 31 1.2
02_05_0013 + 24975298-24975352,24975533-24976494,24976621-249771... 31 1.2
12_01_0272 + 1985348-1986036,1986142-1988020 30 2.1
06_01_1113 - 9164953-9165044,9166453-9166586,9166624-9166734,916... 30 2.1
01_05_0416 + 21956050-21956512,21958001-21958065,21958772-219589... 30 2.1
12_02_1139 - 26402332-26402367,26402915-26402953,26403136-264032... 29 2.7
09_04_0634 - 19132916-19134033,19134716-19135915,19136002-191361... 29 2.7
03_02_0992 + 13049871-13050449 29 2.7
08_02_1139 - 24638824-24639325,24639528-24639713,24639801-246405... 29 3.6
07_03_0169 + 14670994-14673714,14673799-14673879,14675460-146756... 29 3.6
03_01_0347 - 2730242-2730425,2730541-2730692,2730782-2730940,273... 29 3.6
09_04_0723 + 19736958-19737107,19737979-19738480,19738911-197390... 29 4.8
02_01_0401 + 2927581-2927669,2927795-2927921,2928354-2928437,292... 29 4.8
07_03_0511 - 18911673-18911713,18922395-18923361,18926841-189276... 28 6.3
05_05_0014 - 21523259-21523612,21523877-21524187,21524256-21524469 28 6.3
02_05_0546 + 29889861-29890182,29891057-29892798 28 6.3
10_01_0062 - 818396-818538,819482-819693,819936-820420,820540-82... 28 8.3
08_01_0409 + 3625071-3625228,3625829-3625905,3626310-3626889,362... 28 8.3
06_03_0152 + 17287133-17287490,17288541-17288734,17289349-172895... 28 8.3
05_03_0362 - 12973488-12974251,12975346-12975580,12976410-129767... 28 8.3
03_02_0599 - 9730204-9730314,9730766-9731549,9731631-9732051,973... 28 8.3
03_02_0296 + 7191455-7191615,7192031-7192071,7192156-7192741,719... 28 8.3
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 34.3 bits (75), Expect = 0.096
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 434 RKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYSDYDLPKNTLHVI 613
++K +N+T Q V+ D A + S S+ GSR K ER S LPK T +VI
Sbjct: 74 KRKAGRNRTEQEVEMDTATSAPERTETSTSAGGSRKKRRGER-----SKNKLPKETYNVI 128
Query: 614 G-SNPGEP 634
G+P
Sbjct: 129 ALDQDGKP 136
>03_04_0151 -
17729023-17729372,17729441-17730623,17730723-17730953,
17730975-17731036,17732085-17732157,17737044-17737834,
17737932-17738004
Length = 920
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +2
Query: 326 DTASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYV 505
DTA+ DD + + E P+TS + SP R++ N + +P + A +
Sbjct: 684 DTATQKDDA---IENTTETEPATSIIQ-TRPPSPPRKRLNPEGSKDSLRRPIETAMKSPT 739
Query: 506 PTNSKSSTGSRPKE 547
PT+ SSTG K+
Sbjct: 740 PTSGNSSTGGAAKQ 753
>06_02_0013 - 10581449-10585105
Length = 1218
Score = 31.5 bits (68), Expect = 0.67
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = +2
Query: 170 EVKGEMEGLESCIYAVTVSKKPS-TTNDGAGFCSGQRSFISIHSTDQPCLADVDTASNLD 346
E++ + + E+ + + + + S N +G C S + +D P + + D
Sbjct: 434 ELEPDAQVKENALQSTDIEEGESHAKNQPSGECQSANSEEAEPDSDHPSAGYQQSMCSTD 493
Query: 347 DC-NVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKS 523
N++ S+++ T+EES+SN P + ++A N Q D + NS S
Sbjct: 494 VVYNLQGQSIDDQAQPTAEESISNTQHPSEKSQHATNYKDGMHQSADNQQDANTKENSSS 553
>05_03_0459 - 14284513-14286336
Length = 607
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = +2
Query: 224 SKKPSTTNDGAGFCSGQRSFISIHSTDQPCLADVDTASNLDDCNVEVLSLNEVFPSTSEE 403
S S + G+ C+G S S TD AD D+ASN D + + EV P E
Sbjct: 289 SSSSSGASSGSSSCAGSSSSSSGSDTD----ADADSASNRPDTTTDHPTEAEVKPMVEHE 344
Query: 404 SLSND 418
+ D
Sbjct: 345 VMEQD 349
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +2
Query: 395 SEESLSNDDSPVR--RKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQAS 568
S+E S+D+S ++K + K VQ +++ S P +TP+++
Sbjct: 368 SDEDDSSDESSDEDVKQKQTQAKKVQAPVAQESSSSDESSEEDSDMESDEPAKTPQKKIY 427
Query: 569 VYSDYDLPKNTLHVIGSNPGEPKMSYTDP 655
V + + + T +GSN K +P
Sbjct: 428 VSKSFFILQETAVSVGSNKSATKPGQEEP 456
>07_03_1182 -
24610862-24611637,24612223-24612340,24612441-24614120,
24614253-24614320,24615370-24615550
Length = 940
Score = 30.7 bits (66), Expect = 1.2
Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 1/156 (0%)
Frame = +2
Query: 212 AVTVSKKPSTTNDGAGFCSGQRSFISIHSTDQPCLADVDTASNLD-DCNVEVLSLNEVFP 388
A + K+P + +G R+ + + D PC+ + +T++N + P
Sbjct: 486 ARSTEKQPGVSLASVDPLAGFRNLRKLQARDAPCIGEHETSTNEKVHSRISRAQSKSDEP 545
Query: 389 STSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQAS 568
++ S S R K ++ + +P + KS ++ +S G R + P Q
Sbjct: 546 ASRASSPRPTGSSSPRTVQRKAESERRSRPPVSPKSPSKKSSEAASPGGRTRTKPS-QGK 604
Query: 569 VYSDYDLPKNTLHVIGSNPGEPKMSYTDPPKKLSKT 676
+ D ++ K+ I S E +S D K L+ T
Sbjct: 605 NHRDNEVSKSPRSRI-SMVKEIDISIMDFQKPLAST 639
>02_05_0013 +
24975298-24975352,24975533-24976494,24976621-24977136,
24977250-24977442,24978108-24978439
Length = 685
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 3/117 (2%)
Frame = +2
Query: 236 STTNDGAGFCSGQRSFISIHSTDQPCLADVDTASNLDDCNVEVLSLNEVFPS---TSEES 406
ST N G CSG + + S PC + C +SLN V P +
Sbjct: 307 STYNVSLGSCSGSQRKLPFESASSPC--ETALLHKEAPCADHQISLNTVSPQEAPCANHQ 364
Query: 407 LSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYS 577
+S D + +A + +Q + + + V + S R +E P QAS ++
Sbjct: 365 ISLDTVSPQEAPSASPPSTNVIQMEQSEDISNV-IRVEQSEDIRSEEAPNGQASSFA 420
>12_01_0272 + 1985348-1986036,1986142-1988020
Length = 855
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 544 FWSGSCRGFAVCWYVSRFRGVIWLYILHSFVLGVLFPSNGRI-VVGQTLL*C 392
F +GSCR F YV G + LYI F++ + P + G+TL C
Sbjct: 249 FAAGSCRSFKTSIYVIALVGAVLLYIAIQFMVFISEPVKDWLHRAGETLQKC 300
>06_01_1113 -
9164953-9165044,9166453-9166586,9166624-9166734,
9166815-9167066,9167152-9168186,9168313-9169187,
9169476-9169673
Length = 898
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 473 QPDDAAKSTYVPTNSKSSTGSRPKETPERQASVYSDYDLPKNTLHVIGSNPGE-----PK 637
QP A+ ++ ++ + S P Q+++ +P+ T SNP E PK
Sbjct: 503 QPVQASPTSPAKQHAPPAPPSVQASPPTPQSALVEQVHIPEGTTSEPKSNPFEPRRIIPK 562
Query: 638 MSYTDPPKKLSKTMKKFL 691
+ T PK++ K +KF+
Sbjct: 563 LISTYDPKEIDKDKEKFM 580
>01_05_0416 +
21956050-21956512,21958001-21958065,21958772-21958933,
21959006-21959107
Length = 263
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 395 SEESLSNDDSPVRRKKNAKNKTVQNVQP--DDAAKSTYVPTNSKSSTGSRPKETPERQAS 568
+ E+L+ SP R+ ++T + QP D A+S PT +S T R PE +
Sbjct: 35 AHEALARHKSPDFRRTGPPSRTNTSPQPPKDSTARSGRRPTEGRSITEGRRPGRPEEELR 94
Query: 569 V 571
V
Sbjct: 95 V 95
>12_02_1139 -
26402332-26402367,26402915-26402953,26403136-26403287,
26403496-26403997,26404260-26404373,26404509-26404736,
26405375-26405457,26405677-26405824,26406778-26406861
Length = 461
Score = 29.5 bits (63), Expect = 2.7
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +2
Query: 404 SLSNDDSPVRRKKNAKN--KTVQNVQPDDAAKSTYV-PTNSKSSTGSRPKETPERQASVY 574
S+S KKN N K+ ++ + +S V PTNS S+ +PK + E V
Sbjct: 293 SISTTHPNGSNKKNGANHKKSHSDISGSSSGQSAGVLPTNSLGSSKLKPKPSDEISEEVN 352
Query: 575 SDYDLPKNTLHVIGSNPGE-PKMSYTDPPKKLS 670
S P N SNP E P K+LS
Sbjct: 353 SQ---PSNLASRSTSNPKERPTQVNASSKKRLS 382
>09_04_0634 -
19132916-19134033,19134716-19135915,19136002-19136106,
19136273-19136315,19137622-19137740,19138074-19138172,
19138264-19138480
Length = 966
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/93 (29%), Positives = 43/93 (46%)
Frame = +2
Query: 221 VSKKPSTTNDGAGFCSGQRSFISIHSTDQPCLADVDTASNLDDCNVEVLSLNEVFPSTSE 400
V KP T++ G +G SFIS T Q + + S ++D + ++EV PS E
Sbjct: 309 VDSKPDKTSEFIGDVNGSTSFIS-DLTSQ-STSPIMVESLMEDSMDALHIISEVSPSLEE 366
Query: 401 ESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKST 499
++ S + V +N + VQ +D K T
Sbjct: 367 KAGSANAESV-----TENSRIDFVQTEDQLKLT 394
>03_02_0992 + 13049871-13050449
Length = 192
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 390 RHQRRVCPTTILPFEGKRTPRTKLC 464
RH+RRVC TT+ P R +LC
Sbjct: 133 RHRRRVCATTVAPPHPARERGNRLC 157
>08_02_1139 -
24638824-24639325,24639528-24639713,24639801-24640543,
24640709-24640870,24641141-24641500
Length = 650
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +2
Query: 263 CSGQRSFISIHSTDQPCLADVDTASNLDDCNV---EVLSLNEVFPSTSEESLSNDDSPVR 433
C S++ +QP + D +L + + S V P TS+ L NDD P
Sbjct: 169 CPVAEKGFSVNHQNQPSVTDNHQELSLQSSSTAAKDFTSATIVKPKTSDSMLDNDDHPSP 228
Query: 434 RKKNAKNKTVQN 469
+N T +N
Sbjct: 229 ANDQEENATNKN 240
>07_03_0169 +
14670994-14673714,14673799-14673879,14675460-14675612,
14675910-14676073,14676162-14676309,14676426-14676548,
14676754-14676841,14677493-14677674
Length = 1219
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2
Query: 353 NVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTG 532
++E +S+ + +S + N D PV K+ ++QP D+AKS T SK+ +
Sbjct: 464 SLENMSVPVIHHDSSSTNYMNSDVPVTTSIQEGLKS--SLQPSDSAKSLETYTASKAMSA 521
Query: 533 SRPKETPE 556
++ E E
Sbjct: 522 AQDSECNE 529
>03_01_0347 -
2730242-2730425,2730541-2730692,2730782-2730940,
2734144-2734618,2734713-2734775,2734870-2735078
Length = 413
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -2
Query: 565 GLSFWCFFWSG-SCRGFAV 512
GL FWC +SG +C GF V
Sbjct: 293 GLKFWCIVYSGFACNGFTV 311
>09_04_0723 +
19736958-19737107,19737979-19738480,19738911-19739061,
19739659-19739766,19739789-19739818,19739894-19740303,
19740797-19740882,19740989-19741058,19741413-19741585,
19741644-19741725,19742131-19742288
Length = 639
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 11/104 (10%)
Frame = +2
Query: 329 TASNLDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQ-----------NVQ 475
T+ N NV +EVF +T+ + DS + R KNA V NV+
Sbjct: 377 TSRNKRSSNVNSKRKSEVFRATAADGAEGLDSEIPRVKNALPPVVDVSTMKFVSCSVNVK 436
Query: 476 PDDAAKSTYVPTNSKSSTGSRPKETPERQASVYSDYDLPKNTLH 607
AA + +V + G K+ + + + + Y ++ LH
Sbjct: 437 ETAAANAGFVDMEADFHQGGGAKDNKDLKFASFKSYLKKRDDLH 480
>02_01_0401 +
2927581-2927669,2927795-2927921,2928354-2928437,
2928546-2928662,2928754-2928945,2929031-2929234,
2929322-2929809,2930429-2930528,2930686-2930745,
2931007-2931126,2931407-2931751
Length = 641
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -3
Query: 438 FLRTGESS--LDKLSSDVDGNTSFRLSTSTLQSSRFEAVSTSAKHGWSVE 295
FLR ESS L K SSD +++ RLS STL S ++ S SV+
Sbjct: 327 FLRLSESSKMLPKESSDCSSSSAERLSGSTLASFSDSSIIPSMLRSPSVD 376
>07_03_0511 -
18911673-18911713,18922395-18923361,18926841-18927659,
18928152-18928757
Length = 810
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 341 LDDCNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSK 520
+DD + + LN+V S L+ND + V K+ +K + PD+ + +P K
Sbjct: 699 IDDSGMTTVDLNKVGYSDEPFVLANDVTQVSFVKDMSSKGTKGRGPDEPKRHVVLPGKRK 758
>05_05_0014 - 21523259-21523612,21523877-21524187,21524256-21524469
Length = 292
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 374 NEVFPSTSEESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNSKSSTGSRPKETP 553
N PS++ + +N+D+ K+ K K PDD+ ST ++ GS ++
Sbjct: 211 NRAAPSSTAAAFANEDAAESSGKSQKRK---RSAPDDSLDSTSSSDDNGGCDGSMLQQQQ 267
Query: 554 ERQ 562
+RQ
Sbjct: 268 QRQ 270
>02_05_0546 + 29889861-29890182,29891057-29892798
Length = 687
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +2
Query: 464 QNVQPDDAAKSTYVPTNSKSSTGSRPKETPERQAS---VYSDYDLPKNTLH 607
+N +P D +S+ +P NSK TG++ ++P + S V D +TLH
Sbjct: 378 RNEKPPDELQSSGLPANSK--TGTQSGKSPNEEVSSVLVSGSADSTNDTLH 426
>10_01_0062 -
818396-818538,819482-819693,819936-820420,820540-820696,
820787-820924,821127-821703,821978-822018,822679-822809
Length = 627
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 480 SGCTFCTVLFLAFFFLRT 427
+GC FC LFL F FL T
Sbjct: 355 TGCLFCGPLFLTFCFLNT 372
>08_01_0409 +
3625071-3625228,3625829-3625905,3626310-3626889,
3626974-3627111,3627318-3627387,3627449-3627933,
3628681-3628890,3629259-3629326,3629855-3629961,
3630275-3630346,3630448-3630614,3630709-3630820,
3631464-3631650,3632174-3632286
Length = 847
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 480 SGCTFCTVLFLAFFFLRT 427
+GC FC LFL F FL T
Sbjct: 348 TGCLFCGPLFLTFCFLNT 365
>06_03_0152 +
17287133-17287490,17288541-17288734,17289349-17289557,
17289640-17289742,17290128-17290291,17290554-17290692,
17290908-17291078,17291162-17291298,17291445-17291759,
17291906-17291965,17292372-17292511,17292691-17292788,
17292875-17293387
Length = 866
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 341 LDDCNVEVLSLNEVFPSTS-EESLSNDDSPVRRKKNAKNKTVQNVQPDDAAKSTYVPTNS 517
L+DC + S+ EVF S ++ L DD+ + K KNK QN + K V N
Sbjct: 378 LNDCQLHPDSI-EVFLSLRFDDDLGKDDTEEEKGKPKKNKRRQN---QEVPKQLPVSDNK 433
Query: 518 KSSTGSRPKETPERQASVYS 577
K+ K E A + S
Sbjct: 434 KAKQELISKAREEVDAELRS 453
>05_03_0362 -
12973488-12974251,12975346-12975580,12976410-12976738,
12977277-12977404,12977695-12977879,12977972-12978165,
12978239-12978368,12978507-12978566,12979037-12979059,
12979158-12979218,12979677-12979748,12979804-12979924,
12980351-12980415,12980973-12981089,12981970-12982239
Length = 917
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +2
Query: 326 DTASNLDD-CNVEVLSLNEVFPSTSEESLSNDDSPVRRKKNAKNKT-VQNVQPDDAAKST 499
++ ++LDD C ++ SL ST +N+ S K K +T QN+ + K+
Sbjct: 488 NSVADLDDSCGQDMTSL-----STKPTIATNESSSKSYSKKRKQETDSQNLHVSGSDKTV 542
Query: 500 YVPTNSKSSTGSRPKET 550
P KSS+ S ET
Sbjct: 543 ISPKKRKSSSMSTTSET 559
>03_02_0599 -
9730204-9730314,9730766-9731549,9731631-9732051,
9732139-9732385,9733730-9733921,9734071-9734204,
9734316-9734477,9736162-9736200,9737507-9737825
Length = 802
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 464 QNVQP-DDAAKSTYVPTNSKSSTGSRPKETPERQASVYSDYDLPKNTLHVIGSNPGEPKM 640
Q + P + + ++PT +K S G + KE + Y + P+N+ S+P E +
Sbjct: 335 QVIHPTSEICSNRWLPTANKRS-GKKHKENNDDSMGKYLEIGAPRNSSMEYQSSPREMSV 393
Query: 641 SYTDPPKKLSKTMKKFLRNMD 703
+ T+ + K R D
Sbjct: 394 NPTEKQHETLMPQSKTTRETD 414
>03_02_0296 +
7191455-7191615,7192031-7192071,7192156-7192741,
7193307-7193444,7193572-7193728,7193848-7194332,
7194867-7195086
Length = 595
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 480 SGCTFCTVLFLAFFFLRT 427
+GC FC LFL F FL T
Sbjct: 368 TGCLFCGPLFLTFCFLNT 385
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,067,791
Number of Sequences: 37544
Number of extensions: 395994
Number of successful extensions: 1312
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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