Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13b08
(557 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein. 88 2e-17
BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein. 88 2e-17
BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein. 88 2e-17
BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein. 88 2e-17
BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein. 88 2e-17
AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein. 88 2e-17
AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein. 80 6e-15
BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open read... 77 4e-14
AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein. 76 1e-13
AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein pr... 69 8e-12
>BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein.
Length = 210
Score = 87.8 bits (208), Expect = 2e-17
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 6/101 (5%)
Frame = +1
Query: 238 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 399
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 400 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRD 522
FH + ++PM EVALT I++ + + VIAGYY A E +D
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKD 101
>BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 87.8 bits (208), Expect = 2e-17
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 6/101 (5%)
Frame = +1
Query: 238 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 399
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 400 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRD 522
FH + ++PM EVALT I++ + + VIAGYY A E +D
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKD 101
>BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 87.8 bits (208), Expect = 2e-17
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 6/101 (5%)
Frame = +1
Query: 238 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 399
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 400 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRD 522
FH + ++PM EVALT I++ + + VIAGYY A E +D
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKD 101
>BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 87.8 bits (208), Expect = 2e-17
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 6/101 (5%)
Frame = +1
Query: 238 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 399
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 400 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRD 522
FH + ++PM EVALT I++ + + VIAGYY A E +D
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKD 101
>BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 87.8 bits (208), Expect = 2e-17
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 6/101 (5%)
Frame = +1
Query: 238 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 399
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 400 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRD 522
FH + ++PM EVALT I++ + + VIAGYY A E +D
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKD 101
>AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein.
Length = 210
Score = 87.8 bits (208), Expect = 2e-17
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 6/101 (5%)
Frame = +1
Query: 238 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 399
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 400 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRD 522
FH + ++PM EVALT I++ + + VIAGYY A E +D
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKD 101
>AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 79.8 bits (188), Expect = 6e-15
Identities = 42/89 (47%), Positives = 53/89 (59%)
Frame = +1
Query: 238 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 417
M EV I AY K+ LHAA+YPH AVNG+ LA A ++ EG L + D +PLFH
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGEG-----LCLTDCVPLFHSHLA 55
Query: 418 VSPMAEVALTQIETIAQSENCVIAGYYAA 504
+S M EVAL Q++ V+AGYY A
Sbjct: 56 LSVMLEVALNQVDVWGAQAGLVVAGYYHA 84
>BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open reading
frame 122 protein.
Length = 208
Score = 77.0 bits (181), Expect = 4e-14
Identities = 41/89 (46%), Positives = 52/89 (58%)
Frame = +1
Query: 238 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 417
M EV I AY K+ LHAA+YPH AVNG+ LA A ++ E L + D +PLFH
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGE-----CLCLTDCVPLFHSHLA 55
Query: 418 VSPMAEVALTQIETIAQSENCVIAGYYAA 504
+S M EVAL Q++ V+AGYY A
Sbjct: 56 LSVMLEVALNQVDVWGAQAGLVVAGYYHA 84
>AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 75.8 bits (178), Expect = 1e-13
Identities = 40/89 (44%), Positives = 50/89 (56%)
Frame = +1
Query: 238 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 417
M EV I Y K+ LHAA+YPH AVNG+ LA A G + L + D +PLFH
Sbjct: 1 MGEVEISGPGYVKMCLHAARYPHAAVNGLFLAPA-----TGSGECLCLTDCVPLFHSHLA 55
Query: 418 VSPMAEVALTQIETIAQSENCVIAGYYAA 504
+S M EVAL Q++ V+AGYY A
Sbjct: 56 LSVMLEVALNQVDVWGAQAGLVVAGYYHA 84
>AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein
protein.
Length = 77
Score = 69.3 bits (162), Expect = 8e-12
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +1
Query: 238 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 399
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 400 FHHSHYVSPMAEVALT 447
FH + ++PM EVALT
Sbjct: 61 FHGTLALAPMLEVALT 76
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,417,922
Number of Sequences: 237096
Number of extensions: 1367797
Number of successful extensions: 5942
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5932
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -