Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13b08
         (557 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-4|CAB02093.1|  196|Caenorhabditis elegans Hypothetical pr...    35   0.046
Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical p...    27   6.9  

>Z79754-4|CAB02093.1|  196|Caenorhabditis elegans Hypothetical
           protein F25H2.4 protein.
          Length = 196

 Score = 34.7 bits (76), Expect = 0.046
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +1

Query: 253 IETGA--YAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHYVSP 426
           +ET A  Y+ IILH  KYP   V G+L+ +    K+G +   + +   +PL H S  ++P
Sbjct: 5   VETQALPYSTIILHCLKYPAKGVFGLLIGN----KKGDK---VTVTSCVPLCHESTPLAP 57

Query: 427 MAEVA 441
             E+A
Sbjct: 58  PLELA 62


>Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 366 VPATFLSLSGISKKHTIHSTVWILSGVQYYFSV 268
           +  T+  L  IS +  + + +W+L    YY SV
Sbjct: 280 IDKTYSCLRNISAQEVLDAQLWVLQNTTYYISV 312


>Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 366 VPATFLSLSGISKKHTIHSTVWILSGVQYYFSV 268
           +  T+  L  IS +  + + +W+L    YY SV
Sbjct: 280 IDKTYSCLRNISAQEVLDAQLWVLQNTTYYISV 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,293,463
Number of Sequences: 27780
Number of extensions: 210710
Number of successful extensions: 532
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)