Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13b06
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    27   0.59 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   1.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   3.1  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 26.6 bits (56), Expect = 0.59
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +2

Query: 206 FRTFTVIYCTIIAVYGILGPTRTLNKYKMPKFVK 307
           F   T+I+C++  + G+L  +   N++++ K  K
Sbjct: 559 FVLLTIIFCSVYRILGVLILSALANRFRIHKLTK 592


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 579 VRYHLHILFSSIKHDSLSR 523
           +  HLH LFS+++H  L +
Sbjct: 424 INIHLHALFSAVEHGHLEK 442


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 398 FVLVIWRSLDLIIFSAKLHE 457
           FV++I+  + L +FS KLH+
Sbjct: 255 FVIIIYAIIGLELFSGKLHK 274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,188
Number of Sequences: 2352
Number of extensions: 11165
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)