Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13b04
         (689 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194...    29   2.6  
06_03_1307 + 29218055-29218159,29218249-29218362,29218448-292186...    28   6.1  
02_05_0344 + 28141075-28141153,28141341-28141500,28141694-28141919     28   6.1  
08_01_0991 + 10030636-10031064,10031209-10031364,10031443-100315...    28   8.0  

>04_03_1002 -
           21617339-21617362,21618476-21618565,21618755-21619432,
           21619536-21619772,21619849-21619896,21619995-21620045,
           21620301-21620426,21620557-21620697,21621165-21621401,
           21622467-21622571,21622812-21622982,21623306-21623380,
           21623754-21623936,21624151-21624297,21624365-21624472,
           21624605-21624709,21625109-21625213,21625322-21625381,
           21625512-21625579,21625876-21625954,21626208-21626267,
           21626445-21626498,21626834-21626886,21627405-21627494,
           21628265-21628362,21628464-21628852
          Length = 1193

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
 Frame = +3

Query: 138 TIASSGVMSVDEAHRVLTKFTGEPILLKNCIQEI-----NDVIRPYQQSIKV------TY 284
           T+ + GV S  + H + T   G   LL+    EI     ND++ P  Q++++      TY
Sbjct: 194 TVFAYGVTSSGKTHTMHTP--GREFLLRVSYLEIYNEVINDLLDPIGQNLRIREDAQGTY 251

Query: 285 NESTNEEVVIFLTHAWDSISESQK 356
            E   EEVV+   HA   I+  ++
Sbjct: 252 VEGIKEEVVLSPAHALSLIASGEE 275


>06_03_1307 +
           29218055-29218159,29218249-29218362,29218448-29218660,
           29218967-29219457,29219653-29219752,29219835-29219894,
           29220055-29220147,29220270-29220368,29220484-29220804
          Length = 531

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 327 AWDSISESQKIFTAKELDYFRLLIEEIMSID 419
           +W S+ + Q  + A+ L  FRLLIE++  ++
Sbjct: 288 SWMSVGKKQLEYAAESLRKFRLLIEQLAEVN 318


>02_05_0344 + 28141075-28141153,28141341-28141500,28141694-28141919
          Length = 154

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 513 WCKMYYLEKIQNKYRLGVRTINEFEDYFEKYMPDVMK 623
           W  ++ ++   ++Y LGVR I E  DY+  Y  ++ +
Sbjct: 65  WKDVFIVQDRCDRYGLGVRIIREGSDYYLIYQGEIQR 101


>08_01_0991 +
           10030636-10031064,10031209-10031364,10031443-10031554,
           10031710-10031876,10031962-10032848,10032927-10032987,
           10033009-10033097,10033180-10033468,10033520-10033564
          Length = 744

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 27/132 (20%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
 Frame = +3

Query: 252 RPYQQSIKVTYNESTNEEVVIFLTHAWDSISESQKIFTAKELDY--FRLLIEEIMSIDVR 425
           R  +++I   YN+  +  +++ +T  W +      I      D+   +L I+E  +  V+
Sbjct: 621 RQDKENIMCAYNQYPHW-ILLVITPKWSTCHYLNSIIDKNAYDWTPIQLAIDEAWAQYVQ 679

Query: 426 EITGIHAINLVNKMGQKISMLQAENLLAKWCKMYYLEKIQNKYRLGVRTINEFEDYFEKY 605
              G+        + +K   ++ +  +   C  +    ++  YR  V+T+ EFE  ++KY
Sbjct: 680 R-RGLRKTGYDTLIHKKDFPVKQQ--IGDQCGFHVCHNMRLLYREKVKTLAEFEVKYDKY 736

Query: 606 MPDVMKDCYICK 641
               +  C IC+
Sbjct: 737 ----LNGCEICE 744


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,611,088
Number of Sequences: 37544
Number of extensions: 278126
Number of successful extensions: 649
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)