Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13b04
         (689 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051646-1|AAK93070.1|  235|Drosophila melanogaster GM14348p pro...    67   2e-11
AE014134-1137|AAF52422.1|  235|Drosophila melanogaster CG11329-P...    67   2e-11
AY069627-1|AAL39772.1|  454|Drosophila melanogaster LD39612p pro...    33   0.37 
AE014298-2440|AAF48638.1|  454|Drosophila melanogaster CG9723-PA...    33   0.37 

>AY051646-1|AAK93070.1|  235|Drosophila melanogaster GM14348p
           protein.
          Length = 235

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
 Frame = +3

Query: 201 GEPILLKNCIQEINDVIRPYQQSIK-VTYNESTNEEVVIFLTHAW-DSISESQKIFTAKE 374
           G    ++  + EIND I    Q +  + Y     E +V   T A  DS++ +    TA+E
Sbjct: 40  GSKEAIRALVAEINDTISDLGQLLVFIKYPVKAEEYLVYAKTDATPDSVANTG--LTAEE 97

Query: 375 LDYFRLLIEEIMSIDVREITGIHAIN--LVNKMGQKISMLQAENLLAKWCKMYYLEKIQN 548
             YF  L+++I S +   I    A N  ++    + +   + + LL KW +M Y  ++ +
Sbjct: 98  CQYFSKLLDKIASEEDCHIAWNDAYNDIVLQASSKPLKKSRMQELLQKWIQMGYFMEVTD 157

Query: 549 KYRLGVRTINEFEDYFEKYMPDVMKDCYICKKNVFWGANCIACGKSY 689
           +  LG R++ E   Y      D +K+C +CK  V W   C +C   Y
Sbjct: 158 RIYLGPRSLVELSFYLSSNHADNIKNCTLCKCLVLWDIRCGSCNIQY 204


>AE014134-1137|AAF52422.1|  235|Drosophila melanogaster CG11329-PA
           protein.
          Length = 235

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
 Frame = +3

Query: 201 GEPILLKNCIQEINDVIRPYQQSIK-VTYNESTNEEVVIFLTHAW-DSISESQKIFTAKE 374
           G    ++  + EIND I    Q +  + Y     E +V   T A  DS++ +    TA+E
Sbjct: 40  GSKEAIRALVAEINDTISDLGQLLVFIKYPVKAEEYLVYAKTDATPDSVANTG--LTAEE 97

Query: 375 LDYFRLLIEEIMSIDVREITGIHAIN--LVNKMGQKISMLQAENLLAKWCKMYYLEKIQN 548
             YF  L+++I S +   I    A N  ++    + +   + + LL KW +M Y  ++ +
Sbjct: 98  CQYFSKLLDKIASEEDCHIAWNDAYNDIVLQASSKPLKKSRMQELLQKWIQMGYFMEVTD 157

Query: 549 KYRLGVRTINEFEDYFEKYMPDVMKDCYICKKNVFWGANCIACGKSY 689
           +  LG R++ E   Y      D +K+C +CK  V W   C +C   Y
Sbjct: 158 RIYLGPRSLVELSFYLSSNHADNIKNCTLCKCLVLWDIRCGSCNIQY 204


>AY069627-1|AAL39772.1|  454|Drosophila melanogaster LD39612p
           protein.
          Length = 454

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -1

Query: 689 IAFSTCYAVSPPKNIFLTNVTIFHYIRHVFLKIIFKFIYGSHT*AV-FILYLL*VVHFTP 513
           I+F  CY + PPKN    + TI  ++    +  +  +    HT AV FI+ L+ V H+ P
Sbjct: 241 ISFLICYRIGPPKN--PRSQTIVMWVLQA-IGAVMAYFSSWHTSAVIFIMVLVFVAHYFP 297

Query: 512 FS 507
            S
Sbjct: 298 IS 299


>AE014298-2440|AAF48638.1|  454|Drosophila melanogaster CG9723-PA
           protein.
          Length = 454

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -1

Query: 689 IAFSTCYAVSPPKNIFLTNVTIFHYIRHVFLKIIFKFIYGSHT*AV-FILYLL*VVHFTP 513
           I+F  CY + PPKN    + TI  ++    +  +  +    HT AV FI+ L+ V H+ P
Sbjct: 241 ISFLICYRIGPPKN--PRSQTIVMWVLQA-IGAVMAYFSSWHTSAVIFIMVLVFVAHYFP 297

Query: 512 FS 507
            S
Sbjct: 298 IS 299


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,401,306
Number of Sequences: 53049
Number of extensions: 514435
Number of successful extensions: 1392
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)