Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13b03
         (624 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0923 + 29441740-29441980,29442321-29442401,29442630-294427...    28   5.2  
03_05_0226 - 22115285-22115404,22115477-22116661,22117037-221178...    28   5.2  
03_03_0050 - 14086954-14087079,14087152-14088045                       28   5.2  
05_02_0157 + 7171791-7172030,7172635-7172667,7172966-7173037,717...    28   6.9  
04_03_0659 - 18453778-18453903,18453976-18454963,18455496-184562...    27   9.2  

>04_04_0923 +
           29441740-29441980,29442321-29442401,29442630-29442719,
           29443123-29443203,29443721-29443774,29444062-29444111,
           29444542-29444623,29444734-29444838,29445514-29445641,
           29445726-29445797,29445887-29445937,29446029-29446100,
           29446201-29446278,29446446-29447270,29447648-29448556
          Length = 972

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 162 KIAKRLNILSVPRKYIID 215
           KI   LNI+ +P+KYIID
Sbjct: 881 KIMLHLNIMKIPKKYIID 898


>03_05_0226 -
           22115285-22115404,22115477-22116661,22117037-22117861,
           22118029-22118106,22118370-22118420,22118510-22118581,
           22118666-22118667,22119453-22119557,22119668-22119749,
           22120178-22120227,22120514-22120567,22121084-22121164,
           22121567-22121656,22121884-22121964,22122304-22122544
          Length = 1038

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 162 KIAKRLNILSVPRKYIID 215
           KI   LNI+ +P+KYIID
Sbjct: 815 KIMLHLNIMKIPKKYIID 832


>03_03_0050 - 14086954-14087079,14087152-14088045
          Length = 339

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 162 KIAKRLNILSVPRKYIID 215
           KI   LNI+ +P+KYIID
Sbjct: 114 KIMLHLNIMKIPKKYIID 131


>05_02_0157 +
           7171791-7172030,7172635-7172667,7172966-7173037,
           7175212-7175310,7176135-7176194,7176347-7176463
          Length = 206

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 297 DVSWPYLRRFLILKKTYKQRFNEERLERI 383
           D+ W Y   F+IL+K YK R++ E++ ++
Sbjct: 77  DMLWSYKNNFIILEKIYK-RWDTEKISQM 104


>04_03_0659 -
           18453778-18453903,18453976-18454963,18455496-18456229,
           18456292-18456360,18456528-18456605,18456703-18456789,
           18456881-18456931,18457021-18457092,18457177-18457304,
           18458194-18458275,18458705-18458754,18459043-18459096,
           18459586-18459675,18459903-18459983,18460443-18460538,
           18460960-18461022,18461313-18461402,18461630-18461698,
           18462051-18462291
          Length = 1082

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 162 KIAKRLNILSVPRKYIID 215
           KI   LNI+ +P KYIID
Sbjct: 857 KIMLHLNIMKIPEKYIID 874


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,247,036
Number of Sequences: 37544
Number of extensions: 380155
Number of successful extensions: 852
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)