Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13b03
         (624 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY603755-1|AAT80901.1| 3094|Homo sapiens striated muscle prefere...    31   4.4  
AB037718-1|BAA92535.1| 2242|Homo sapiens KIAA1297 protein protein.     31   4.4  
BC008833-1|AAH08833.1|  425|Homo sapiens coiled-coil domain cont...    30   5.8  
AK000298-1|BAA91065.1|  425|Homo sapiens protein ( Homo sapiens ...    30   5.8  

>AY603755-1|AAT80901.1| 3094|Homo sapiens striated muscle
            preferentially expressed protein protein.
          Length = 3094

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +3

Query: 189  SVPRKYIIDTGEGMPAYTPRGIR 257
            S P+ +++DTG  +PA TP+G++
Sbjct: 2741 SEPKPFVLDTGTPIPASTPQGVK 2763


>AB037718-1|BAA92535.1| 2242|Homo sapiens KIAA1297 protein protein.
          Length = 2242

 Score = 30.7 bits (66), Expect = 4.4
 Identities = 10/23 (43%), Positives = 18/23 (78%)
 Frame = +3

Query: 189  SVPRKYIIDTGEGMPAYTPRGIR 257
            S P+ +++DTG  +PA TP+G++
Sbjct: 1889 SEPKPFVLDTGTPIPASTPQGVK 1911


>BC008833-1|AAH08833.1|  425|Homo sapiens coiled-coil domain
           containing 49 protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +3

Query: 231 PAYTPRGIRKSALNSQLSDRVHDVSWPYLRRFLILKKTYKQRFNEERLERID 386
           P YT R +    L  +  + + +  W    R  ILK+  K    E+RLE++D
Sbjct: 330 PGYT-RKLSAEELERKRQEMMENAKWREEERLNILKRHAKDEEREQRLEKLD 380


>AK000298-1|BAA91065.1|  425|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20291 fis, clone HEP04788. ).
          Length = 425

 Score = 30.3 bits (65), Expect = 5.8
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +3

Query: 231 PAYTPRGIRKSALNSQLSDRVHDVSWPYLRRFLILKKTYKQRFNEERLERID 386
           P YT R +    L  +  + + +  W    R  ILK+  K    E+RLE++D
Sbjct: 330 PGYT-RKLSAEELERKRQEMMENAKWREEERLNILKRHAKDEEREQRLEKLD 380


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,428,082
Number of Sequences: 237096
Number of extensions: 2081384
Number of successful extensions: 3845
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3845
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)