Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13b02
(372 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical p... 30 0.46
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 30 0.46
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 30 0.61
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 30 0.61
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 30 0.61
Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical pr... 29 0.80
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 1.4
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 1.4
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 28 1.9
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 27 3.2
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 5.7
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 26 7.5
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 26 7.5
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 26 7.5
Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical pr... 26 9.9
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 26 9.9
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 26 9.9
U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical pr... 26 9.9
AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical ... 26 9.9
AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B ... 26 9.9
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 26 9.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 26 9.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 26 9.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 26 9.9
>Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical
protein K10C8.3b protein.
Length = 141
Score = 30.3 bits (65), Expect = 0.46
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = -1
Query: 345 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPHH 169
R S+ ++ + +RP + R ++ P P R RS + + K + V P+H
Sbjct: 17 RKKSKSVKRCSSCKRPNSTRRSKTPDPNSEKEKVRNRSGSSSKKEKKNSLVNPNLQPNH 75
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 30.3 bits (65), Expect = 0.46
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -3
Query: 364 PPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDA 224
PPLR S Q H H R P HS + R E P AL+ A
Sbjct: 308 PPLRPPPSSLQHHHHHRRSPPLFHSPVYKPKPRSRTES--PAALKAA 352
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 29.9 bits (64), Expect = 0.61
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 371 RRSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS 258
R +T GGA P +GT+ PP P + L +R Q+
Sbjct: 260 RGATSTGGASPTSGTNSPPVFPKTSSSSSLLMLRDSQN 297
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 29.9 bits (64), Expect = 0.61
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 371 RRSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS 258
R +T GGA P +GT+ PP P + L +R Q+
Sbjct: 560 RGATSTGGASPTSGTNSPPVFPKTSSSSSLLMLRDSQN 597
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 29.9 bits (64), Expect = 0.61
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -2
Query: 356 PGGAEP*AGTSGPPQRPGAQAQ 291
PGG P G SGPP RPGA Q
Sbjct: 204 PGGDAP-PGPSGPPGRPGAPGQ 224
>Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical
protein C01F6.5 protein.
Length = 223
Score = 29.5 bits (63), Expect = 0.80
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2
Query: 332 GTSGPPQRPGAQAQRETLGVRS 267
GT+GP +RP AQ +R++ G+R+
Sbjct: 38 GTAGPSRRPTAQPRRQSGGIRT 59
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 367 GPPLRAVQSREQGHQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAPSP 215
GPP +A + Q Q + P P+ ++H A +A +A PG + P P
Sbjct: 632 GPPQQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPP 683
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 367 GPPLRAVQSREQGHQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAPSP 215
GPP +A + Q Q + P P+ ++H A +A +A PG + P P
Sbjct: 632 GPPQQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPP 683
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 28.3 bits (60), Expect = 1.9
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 328 HQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAPSPE*TFSTCLVSTESTPFP 164
+ HH+ P P H H + + E++ ++ DAP T T LV +S P
Sbjct: 220 YSQHHQSPPPHHHHHHPMPKIHENPEQVASPSIEDAPE---TKPTHLVEPQSPKSP 272
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 316 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE 212
H GP E+H +E D E LL G L D P +
Sbjct: 258 HSGPVAMKMEEHEETEEDFLE-LLNGTLDDVPDSD 291
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.1 bits (57), Expect = 4.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 321 TTTEARRPGTARNTRRPKPTELSACCRERSETP 223
TTT +RP T T P+P E +E++E P
Sbjct: 163 TTTTTKRPPTTTTTEDPQPFEFHE-LQEQAENP 194
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 359 PPGGAEP*AGTSGPPQRPG 303
PPG A P AG +GPP PG
Sbjct: 170 PPGPAGP-AGNAGPPGAPG 187
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 365 STPPGGAEP*AGTSGPPQRPGAQAQ 291
+TP GGA G GPP PG Q
Sbjct: 194 NTPSGGAAGPPGPPGPPGGPGNDGQ 218
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 339 VSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSET 226
V +++RT+ RRP T R P+ SA R++ ++
Sbjct: 26 VRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDS 63
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -1
Query: 345 RAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPS 202
RA SR ARR + ++ P P A R +S R R PS
Sbjct: 333 RAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSPS 380
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 26.6 bits (56), Expect = 5.7
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 303 RPGTARNTRRPKPTEL 256
RP T + T++PKPTE+
Sbjct: 189 RPWTVKQTKKPKPTEV 204
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 26.2 bits (55), Expect = 7.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 362 TPPGGAEP*AGTSGPPQRP 306
T PG A P G G PQRP
Sbjct: 293 TTPGSAGPGTGPPGTPQRP 311
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 26.2 bits (55), Expect = 7.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 362 TPPGGAEP*AGTSGPPQRP 306
T PG A P G G PQRP
Sbjct: 291 TTPGSAGPGTGPPGTPQRP 309
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 26.2 bits (55), Expect = 7.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 342 AVSRDIRTTTEARRPGTARNTRRPKPTELSA 250
+ S + T++ ARRP TA+ PT +A
Sbjct: 172 STSNGVATSSSARRPATAKRDTLAAPTSTAA 202
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 26.2 bits (55), Expect = 7.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 342 AVSRDIRTTTEARRPGTARNTRRPKPTELSA 250
+ S + T++ ARRP TA+ PT +A
Sbjct: 172 STSNGVATSSSARRPATAKRDTLAAPTSTAA 202
>Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical
protein R11G10.1b protein.
Length = 478
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 328 HQDHHRGPAPRHSEKHSASEADRAE 254
H H R + HS KH+AS +D E
Sbjct: 19 HAYHSRPKSEEHSPKHAASSSDLFE 43
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
protein F54F3.1 protein.
Length = 1584
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 352 AVQSREQGHQDHHRGPAPRHSEKHS 278
A Q++EQ HQ HH+ P+ + S
Sbjct: 326 ARQAQEQHHQQHHQPDQPQQQPQRS 350
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -3
Query: 346 QSREQGHQDHHRGPAPRH-SEKHSASE 269
Q+ H HH PAPRH S H E
Sbjct: 31 QNGNSHHHHHHLPPAPRHLSSSHHQIE 57
>Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical
protein T19C4.4 protein.
Length = 304
Score = 25.8 bits (54), Expect = 9.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 93 LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAP 242
+R++ +T L+Q + S+ +YYN N +V S DG SL P
Sbjct: 218 IRIAFITCLVQACGTALSVIRYYNMNTSMAVTLANFIPFIS-DGLSLVQP 266
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 ETKQVEKVYSGDGASLSAPGSKRSALSASDAECF-SLCL 299
E + V DG+SL + SKR+ L+ +D + + LCL
Sbjct: 220 EASEALLVQMFDGSSLISAHSKRATLTTTDVQLYRRLCL 258
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 359 PPGGAEP*AGTSGPPQRPGAQAQ 291
PPG A P G GPP PGA +
Sbjct: 184 PPGEAGP-KGPPGPPGSPGAPGE 205
>U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical
protein K05F1.5 protein.
Length = 472
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 249 CCRERSETPRHRNKPSRPVWSRRSPHHFHCSI 154
CC S P+ + SRP + HFHC I
Sbjct: 97 CCPITS-LPKRLDSCSRPFCKLKKKAHFHCKI 127
>AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical
protein Y87G2A.7 protein.
Length = 489
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 93 LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPG 245
++LS+ L QQ+ S+ + Y ++ V KQ+ ++ GA PG
Sbjct: 419 IKLSEQLYLDQQIKLICSLCQLYPVKMINKVAIKQLLELVVFAGADFEMPG 469
>AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B
protein protein.
Length = 478
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 328 HQDHHRGPAPRHSEKHSASEADRAE 254
H H R + HS KH+AS +D E
Sbjct: 19 HAYHSRPKSEEHSPKHAASSSDLFE 43
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 25.8 bits (54), Expect = 9.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 129 IVVLTSSSWRDVIKP 85
I+ TS++W+DVIKP
Sbjct: 15 IIPTTSATWKDVIKP 29
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 359 PPGGAEP*AGTSGPPQRPGA 300
PP G+ P AG+ PP P A
Sbjct: 242 PPKGSPPLAGSGSPPPPPAA 261
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 359 PPGGAEP*AGTSGPPQRPGA 300
PP G+ P AG+ PP P A
Sbjct: 263 PPKGSPPLAGSGSPPPPPAA 282
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 359 PPGGAEP*AGTSGPPQRPGA 300
PP G+ P AG+ PP P A
Sbjct: 248 PPKGSPPLAGSGSPPPPPAA 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,298,529
Number of Sequences: 27780
Number of extensions: 194268
Number of successful extensions: 1128
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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