Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13a22
         (606 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007672-1|AAH07672.1|  179|Homo sapiens NADH dehydrogenase (ubi...    91   2e-18
AF261090-1|AAF99683.1|  179|Homo sapiens NADH-ubiquinone dehydro...    91   2e-18
AF044956-1|AAD42057.1|  179|Homo sapiens NADH:ubiquinone oxidore...    91   2e-18
S82655-1|AAB46797.2|  102|Homo sapiens NADH-ubiquinone oxidoredu...    50   5e-06
BC014794-1|AAH14794.1|  580|Homo sapiens ULK4 protein protein.         30   7.3  
AK000581-1|BAA91270.1|  542|Homo sapiens protein ( Homo sapiens ...    30   7.3  
BC031070-1|AAH31070.1|  584|Homo sapiens RPAP2 protein protein.        29   9.6  

>BC007672-1|AAH07672.1|  179|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 9, 22kDa protein.
          Length = 179

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
 Frame = +2

Query: 152 SHSQKVCNFYKRAMRTLEAYHVARYVIRYHQVILRNELDKNKAVCDPKEHRRLLRVAENE 331
           +H QKV   YKRA+R LE++ V R   RY   ++R   +++K   D  +  +LL+ AE E
Sbjct: 11  THQQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKDMAKATQLLKEAEEE 70

Query: 332 LFMSQHPIPVAKFARSVGIAGGVAYDRVQV--IPDWVMDYWHPLEKAHYPEYFKRRE 496
            +  QHP P   F  S    GG +Y+R     +P+W +D WHP EKA YP+YF +RE
Sbjct: 71  FWYRQHPQPYI-FPDS---PGGTSYERYDCYKVPEWCLDDWHPSEKAMYPDYFAKRE 123


>AF261090-1|AAF99683.1|  179|Homo sapiens NADH-ubiquinone
           dehydrogenase 1 beta subcomplex protein.
          Length = 179

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
 Frame = +2

Query: 152 SHSQKVCNFYKRAMRTLEAYHVARYVIRYHQVILRNELDKNKAVCDPKEHRRLLRVAENE 331
           +H QKV   YKRA+R LE++ V R   RY   ++R   +++K   D  +  +LL+ AE E
Sbjct: 11  THQQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKDMAKATQLLKEAEEE 70

Query: 332 LFMSQHPIPVAKFARSVGIAGGVAYDRVQV--IPDWVMDYWHPLEKAHYPEYFKRRE 496
            +  QHP P   F  S    GG +Y+R     +P+W +D WHP EKA YP+YF +RE
Sbjct: 71  FWYRQHPQPYI-FPDS---PGGTSYERYDCYKVPEWCLDDWHPSEKAMYPDYFAKRE 123


>AF044956-1|AAD42057.1|  179|Homo sapiens NADH:ubiquinone
           oxidoreductase B22 subunit protein.
          Length = 179

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
 Frame = +2

Query: 152 SHSQKVCNFYKRAMRTLEAYHVARYVIRYHQVILRNELDKNKAVCDPKEHRRLLRVAENE 331
           +H QKV   YKRA+R LE++ V R   RY   ++R   +++K   D  +  +LL+ AE E
Sbjct: 11  THQQKVLRLYKRALRHLESWCVQRDKYRYFACLMRARFEEHKNEKDMAKATQLLKEAEEE 70

Query: 332 LFMSQHPIPVAKFARSVGIAGGVAYDRVQV--IPDWVMDYWHPLEKAHYPEYFKRRE 496
            +  QHP P   F  S    GG +Y+R     +P+W +D WHP EKA YP+YF +RE
Sbjct: 71  FWYRQHPQPYI-FPDS---PGGTSYERYDCYKVPEWCLDDWHPSEKAMYPDYFAKRE 123


>S82655-1|AAB46797.2|  102|Homo sapiens NADH-ubiquinone
           oxidoreductase B22 subunit protein.
          Length = 102

 Score = 50.4 bits (115), Expect = 5e-06
 Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
 Frame = +2

Query: 392 GGVAYDRVQV--IPDWVMDYWHPLEKAHYPEYFKRRE 496
           GG +Y+R     +P+W +D WHP EKA YP+YF +RE
Sbjct: 10  GGTSYERYDCYKVPEWCLDDWHPSEKAMYPDYFAKRE 46


>BC014794-1|AAH14794.1|  580|Homo sapiens ULK4 protein protein.
          Length = 580

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 255 VTNWTKIRRFATLKNIVDY*EWQKTN 332
           +TNW ++ R    KNIV + EW +T+
Sbjct: 43  ITNWVRLTREIKHKNIVTFHEWYETS 68


>AK000581-1|BAA91270.1|  542|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20574 fis, clone REC01035. ).
          Length = 542

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 255 VTNWTKIRRFATLKNIVDY*EWQKTN 332
           +TNW ++ R    KNIV + EW +T+
Sbjct: 43  ITNWVRLTREIKHKNIVTFHEWYETS 68


>BC031070-1|AAH31070.1|  584|Homo sapiens RPAP2 protein protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 9.6
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = +2

Query: 182 KRAMRTLEAYHVARYVIRYHQVILRNELDKNKAVCDPKEHRRLLRVAENEL 334
           +  +R L   + A   ++    +++ ELD++  + DP  H R  R ++N L
Sbjct: 380 EETLRFLYGQNYASVCLKPEASLVKEELDEDDIISDPDSHFRAWRESQNSL 430


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,329,220
Number of Sequences: 237096
Number of extensions: 1398711
Number of successful extensions: 2228
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2225
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)