Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13a19
         (647 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112165-1|AAI12166.1| 1444|Homo sapiens Cdc42 GTPase-activating...    33   1.2  
BC112163-1|AAI12164.1| 1444|Homo sapiens Cdc42 GTPase-activating...    33   1.2  
AB033030-1|BAA86518.1| 1445|Homo sapiens KIAA1204 protein protein.     33   1.2  
Z82208-1|CAI42768.1| 1711|Homo sapiens BCL6 co-repressor-like 1 ...    31   2.7  
AL136450-3|CAI42884.1| 1711|Homo sapiens BCL6 co-repressor-like ...    31   2.7  
AK074089-1|BAB84915.1| 1696|Homo sapiens FLJ00160 protein protein.     31   2.7  

>BC112165-1|AAI12166.1| 1444|Homo sapiens Cdc42 GTPase-activating
            protein protein.
          Length = 1444

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +2

Query: 152  DRKGNCSCGGFPTVTPDPGSLPLLSQTPSLVVKCDQEGDNT 274
            D    C C G PT++P+PGS  LLS T   VV+C +    T
Sbjct: 1276 DATAPCMCEG-PTLSPEPGSSNLLS-TQDAVVQCRKRMSET 1314


>BC112163-1|AAI12164.1| 1444|Homo sapiens Cdc42 GTPase-activating
            protein protein.
          Length = 1444

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +2

Query: 152  DRKGNCSCGGFPTVTPDPGSLPLLSQTPSLVVKCDQEGDNT 274
            D    C C G PT++P+PGS  LLS T   VV+C +    T
Sbjct: 1276 DATAPCMCEG-PTLSPEPGSSNLLS-TQDAVVQCRKRMSET 1314


>AB033030-1|BAA86518.1| 1445|Homo sapiens KIAA1204 protein protein.
          Length = 1445

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +2

Query: 152  DRKGNCSCGGFPTVTPDPGSLPLLSQTPSLVVKCDQEGDNT 274
            D    C C G PT++P+PGS  LLS T   VV+C +    T
Sbjct: 1277 DATAPCMCEG-PTLSPEPGSSNLLS-TQDAVVQCRKRMSET 1315


>Z82208-1|CAI42768.1| 1711|Homo sapiens BCL6 co-repressor-like 1
            protein.
          Length = 1711

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
 Frame = +2

Query: 254  DQEGDNTCKILCNALATATKAKGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAP 433
            +QE +   K   +  A   K    + L  RL++ N L  +      D P  +     E P
Sbjct: 1348 EQEDEQRRKGRADLKARKQKTSSSQSLEHRLRNRNLLLPNKVQGISDSPNGFLPNNLEEP 1407

Query: 434  LCCENSQVKVCSSVVTLK--STVQPEAKTTIIY 526
             C ENS+          K  +TV  EAK  ++Y
Sbjct: 1408 ACLENSEKPSGKRKCKTKHMATVSEEAKDVVLY 1440


>AL136450-3|CAI42884.1| 1711|Homo sapiens BCL6 co-repressor-like 1
            protein.
          Length = 1711

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
 Frame = +2

Query: 254  DQEGDNTCKILCNALATATKAKGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAP 433
            +QE +   K   +  A   K    + L  RL++ N L  +      D P  +     E P
Sbjct: 1348 EQEDEQRRKGRADLKARKQKTSSSQSLEHRLRNRNLLLPNKVQGISDSPNGFLPNNLEEP 1407

Query: 434  LCCENSQVKVCSSVVTLK--STVQPEAKTTIIY 526
             C ENS+          K  +TV  EAK  ++Y
Sbjct: 1408 ACLENSEKPSGKRKCKTKHMATVSEEAKDVVLY 1440


>AK074089-1|BAB84915.1| 1696|Homo sapiens FLJ00160 protein protein.
          Length = 1696

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
 Frame = +2

Query: 254  DQEGDNTCKILCNALATATKAKGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAP 433
            +QE +   K   +  A   K    + L  RL++ N L  +      D P  +     E P
Sbjct: 1333 EQEDEQRRKGRADLKARKQKTSSSQSLEHRLRNRNLLLPNKVQGISDSPNGFLPNNLEEP 1392

Query: 434  LCCENSQVKVCSSVVTLK--STVQPEAKTTIIY 526
             C ENS+          K  +TV  EAK  ++Y
Sbjct: 1393 ACLENSEKPSGKRKCKTKHMATVSEEAKDVVLY 1425


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,793,159
Number of Sequences: 237096
Number of extensions: 1759793
Number of successful extensions: 3663
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3663
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)