Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13a16
         (554 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-1|CAA88965.2|  708|Caenorhabditis elegans Hypothetical pr...    31   0.74 
AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical...    29   1.7  
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z81498-2|CAB04085.1|  760|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protei...    28   5.2  
Z68317-4|CAA92688.1|  486|Caenorhabditis elegans Hypothetical pr...    27   6.9  

>Z49130-1|CAA88965.2|  708|Caenorhabditis elegans Hypothetical
           protein T06D8.2 protein.
          Length = 708

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +3

Query: 102 KWLLKMSNAPDDENEPEKMEEAGELEADVGARFDQQLASIDPRLKIDMDPFAHRDLRPEM 281
           K + ++ N   +    E  + A +L+ ++ A     LAS+DPRL  D  P      RP+ 
Sbjct: 205 KEMEELENDKGEAVADEDFQRANDLQDEITALRSNILASVDPRLLEDTMPRNEEIHRPKN 264

Query: 282 MF 287
           +F
Sbjct: 265 LF 266


>AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical
           protein Y47G6A.3 protein.
          Length = 181

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 195 RFDQQLASIDPRLKIDMDPFAHRDLRPEM 281
           R+D +L  I  +LKI +D  A RDL P++
Sbjct: 48  RYDLRLRQIAEKLKIAVDEMAGRDLHPKL 76


>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
            W06A7.3f protein.
          Length = 2488

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 120  SNAPDDENEPEKMEEAGELEADVGARFDQQLASIDPRLKIDMD 248
            S   DD+N+PE+     + + +V A  DQ+ A      K D D
Sbjct: 1160 SEIKDDQNQPEEFSAEHQGKFEVSAEPDQESAEFQLEAKKDQD 1202


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
            W06A7.3c protein.
          Length = 2484

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 120  SNAPDDENEPEKMEEAGELEADVGARFDQQLASIDPRLKIDMD 248
            S   DD+N+PE+     + + +V A  DQ+ A      K D D
Sbjct: 1160 SEIKDDQNQPEEFSAEHQGKFEVSAEPDQESAEFQLEAKKDQD 1202


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
            W06A7.3a protein.
          Length = 2607

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 120  SNAPDDENEPEKMEEAGELEADVGARFDQQLASIDPRLKIDMD 248
            S   DD+N+PE+     + + +V A  DQ+ A      K D D
Sbjct: 1160 SEIKDDQNQPEEFSAEHQGKFEVSAEPDQESAEFQLEAKKDQD 1202


>Z81498-2|CAB04085.1|  760|Caenorhabditis elegans Hypothetical
           protein F11A6.1b protein.
          Length = 760

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 218 YRSSSENRHGSVCASRLAT--GNDVYTRGVTSGENANFG 328
           Y  S ENRHG+ CA  +A    N +   G+    NAN G
Sbjct: 254 YEFSDENRHGTRCAGEVAAIFNNSLCIVGI--AYNANIG 290


>Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical
           protein F11A6.1a protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 218 YRSSSENRHGSVCASRLAT--GNDVYTRGVTSGENANFG 328
           Y  S ENRHG+ CA  +A    N +   G+    NAN G
Sbjct: 254 YEFSDENRHGTRCAGEVAAIFNNSLCIVGI--AYNANIG 290


>U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protein
           protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 218 YRSSSENRHGSVCASRLAT--GNDVYTRGVTSGENANFG 328
           Y  S ENRHG+ CA  +A    N +   G+    NAN G
Sbjct: 254 YEFSDENRHGTRCAGEVAAIFNNSLCIVGI--AYNANIG 290


>Z68317-4|CAA92688.1|  486|Caenorhabditis elegans Hypothetical
           protein T01H3.4 protein.
          Length = 486

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 180 LPIPLLLPFFRVHFHHLVRSTFSTATSTRPMKIYLPNFDYE 58
           LP P  L F+   FHH    TF  AT +  M  Y PNF+++
Sbjct: 412 LPSPAFLYFY---FHHW---TFFNATKSLLMLGYKPNFEFK 446


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,526,571
Number of Sequences: 27780
Number of extensions: 229947
Number of successful extensions: 714
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)