Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13a11
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation...    29   3.8  
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini...    29   3.8  
AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z81058-6|CAB62801.2|  252|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z74042-1|CAA98536.1|  444|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
            germline protein5 protein.
          Length = 1200

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 56   KTLK*TLKSHYELLSSCTKRISRTRKTLCSTFYQYQIQTQSAKG 187
            K L   +  H  L+ SC + +SR +K +CS F++   +    +G
Sbjct: 1055 KQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEG 1098


>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
            protein MOG-5 protein.
          Length = 1200

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 56   KTLK*TLKSHYELLSSCTKRISRTRKTLCSTFYQYQIQTQSAKG 187
            K L   +  H  L+ SC + +SR +K +CS F++   +    +G
Sbjct: 1055 KQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEG 1098


>AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical
           protein C40A11.7 protein.
          Length = 220

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 463 IKRHYRTYISSDKI-QIFTVNKKPYHVLKITLNKNEFIYL 347
           I    RTY SS ++ QI    KKP  V+    + N+ IY+
Sbjct: 101 INNQIRTYRSSHELLQIIASTKKPVVVINYITHNNDIIYI 140


>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 188 SLARLMALKPLIKTEKRRDLTDHRYN 265
           S A    ++P +KTEK+R+  D RYN
Sbjct: 593 SKAAYSIVRPNLKTEKQRESIDSRYN 618


>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 188 SLARLMALKPLIKTEKRRDLTDHRYN 265
           S A    ++P +KTEK+R+  D RYN
Sbjct: 593 SKAAYSIVRPNLKTEKQRESIDSRYN 618


>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
           protein C33E10.6 protein.
          Length = 1014

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 481 IYNVFIIKRHYRTYISSDKIQIFT-VNKKPYHVLKITLNKNEF 356
           I+  F     Y  Y+ ++ +  +  + K PY  +K  +NKNEF
Sbjct: 530 IFETFHKSNTYLMYLDANNLYGWAMIQKLPYDNIKFEMNKNEF 572


>Z81058-6|CAB62801.2|  252|Caenorhabditis elegans Hypothetical
           protein F11E6.6 protein.
          Length = 252

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 533 TVLFLLMLFIDYTLNIFETALRSESKWILVITFHLSLL 646
           TV F+   F+   +N+    L   S W++ I FH+ ++
Sbjct: 170 TVAFIFYRFVKDDVNLSPPWLLEASLWVIAICFHVFII 207


>Z74042-1|CAA98536.1|  444|Caenorhabditis elegans Hypothetical
           protein T11F9.1 protein.
          Length = 444

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 19/64 (29%), Positives = 36/64 (56%)
 Frame = -1

Query: 529 KPFQNTLCSAARSDLYIYNVFIIKRHYRTYISSDKIQIFTVNKKPYHVLKITLNKNEFIY 350
           + +Q  L + AR ++Y Y     + H+RT ++   I  F++      ++ + L+KNEF +
Sbjct: 189 REYQLNLSALARYEIYGY----WRVHFRTIVTI-LIPFFSLAFINIRIV-LVLSKNEFKF 242

Query: 349 LHTT 338
           LH+T
Sbjct: 243 LHST 246


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,742,928
Number of Sequences: 27780
Number of extensions: 277276
Number of successful extensions: 663
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)