Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte13a10
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014533-1|AAH14533.3|  211|Homo sapiens MYEF2 protein protein.        30   6.8  
AK023133-1|BAB14421.1|  576|Homo sapiens protein ( Homo sapiens ...    30   6.8  
AK002075-1|BAA92070.1|  188|Homo sapiens protein ( Homo sapiens ...    30   6.8  
AF106685-1|AAD43038.1|  547|Homo sapiens myelin gene expression ...    30   6.8  
AB037762-1|BAA92579.1|  620|Homo sapiens KIAA1341 protein protein.     30   6.8  

>BC014533-1|AAH14533.3|  211|Homo sapiens MYEF2 protein protein.
          Length = 211

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 647 GHDVVRFNIHVSVELCCRVFFGMYVSGSDVDV 552
           G   VRF+   S E  CR+  G+ +SG ++DV
Sbjct: 174 GCGTVRFDSPESAEKACRIMNGIKISGREIDV 205


>AK023133-1|BAB14421.1|  576|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13071 fis, clone NT2RP3001792, moderately
           similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
          Length = 576

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 647 GHDVVRFNIHVSVELCCRVFFGMYVSGSDVDV 552
           G   VRF+   S E  CR+  G+ +SG ++DV
Sbjct: 539 GCGTVRFDSPESAEKACRIMNGIKISGREIDV 570


>AK002075-1|BAA92070.1|  188|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11213 fis, clone PLACE1007969, weakly similar to
           HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
          Length = 188

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 647 GHDVVRFNIHVSVELCCRVFFGMYVSGSDVDV 552
           G   VRF+   S E  CR+  G+ +SG ++DV
Sbjct: 151 GCGTVRFDSPESAEKACRIMNGIKISGREIDV 182


>AF106685-1|AAD43038.1|  547|Homo sapiens myelin gene expression
           factor 2 protein.
          Length = 547

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 647 GHDVVRFNIHVSVELCCRVFFGMYVSGSDVDV 552
           G   VRF+   S E  CR+  G+ +SG ++DV
Sbjct: 510 GCGTVRFDSPESAEKACRIMNGIKISGREIDV 541


>AB037762-1|BAA92579.1|  620|Homo sapiens KIAA1341 protein protein.
          Length = 620

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 647 GHDVVRFNIHVSVELCCRVFFGMYVSGSDVDV 552
           G   VRF+   S E  CR+  G+ +SG ++DV
Sbjct: 583 GCGTVRFDSPESAEKACRIMNGIKISGREIDV 614


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,442,682
Number of Sequences: 237096
Number of extensions: 2048859
Number of successful extensions: 4022
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4022
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)