Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13a09
(711 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 103 2e-23
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 35 0.013
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.0
SPBC11C11.05 |||KRE9 family cell wall biosynthesis protein |Schi... 27 2.0
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 27 2.6
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 4.6
SPAC11E3.12 |||conserved eukaryotic protein|Schizosaccharomyces ... 26 6.1
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 25 8.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 8.1
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 25 8.1
SPAC22G7.07c |||mRNA |Schizosaccharomyces pombe|chr 1|||Manual 25 8.1
SPBC1347.13c |||ribose methyltransferase|Schizosaccharomyces pom... 25 8.1
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 103 bits (248), Expect = 2e-23
Identities = 55/151 (36%), Positives = 87/151 (57%)
Frame = +2
Query: 254 KPKTGKIPVDISLGDTKPVSTVDMFRGLMEYVWPKDNQAIRNRVTLSLSLLFGAKVMNVT 433
+P + + + D K V+ + + +++Y+WPK ++ RV +L+LL AK++NV
Sbjct: 76 EPLNTSVKLASDVPDDKNVTGQMIVKDMLQYIWPKGKTNLKVRVVSALALLVAAKILNVQ 135
Query: 434 VPFLFKYAVDEVNQVATTPAGDALLGMATVPQALGTTAFSLLVGYGLARATAAGFNELRN 613
VPF FK +D +N G AL +T ++++GYG AR + F ELRN
Sbjct: 136 VPFYFKSIIDTMNTTLVQEVG-----------ALWSTVGAVVLGYGFARIFSTVFQELRN 184
Query: 614 AVFARVAQHSIRRLACNVFTHLHNLDLGFHL 706
+VFA V+Q +IR ++ NV+ HL NLD+ FHL
Sbjct: 185 SVFAIVSQSAIRSVSSNVYQHLLNLDMNFHL 215
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 34.7 bits (76), Expect = 0.013
Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Frame = +2
Query: 326 FRGLMEYVWPKDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVA-TTPAGDA 502
F L+ Y+WP + ++ ++ + + LLF + +N+ P +++ + + P D
Sbjct: 246 FSTLLPYLWPTKDYRLQFQIFICIVLLFLGRAVNILAPRQLGVLTEKLTKHSEKIPWSDV 305
Query: 503 LLGMATVPQALGTTAFSLLVGYGLARATAAGFNELRNAVFARVAQHSIRRLACNVFTHLH 682
+ L V Y + LR+ ++ V+Q++ R ++ H+
Sbjct: 306 I----------------LFVIYRFLQGNMGVIGSLRSFLWVPVSQYAYRAISTKALRHVL 349
Query: 683 NLDLGFHL 706
NL FHL
Sbjct: 350 NLSYDFHL 357
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2685
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 83 VRSVTSNHS--IILNKPQLSIVCKQCAVTSYLR 175
V S+T HS ++LN P ++I C A+ Y R
Sbjct: 371 VESITPGHSPHVLLNIPLVTITCLTSALAEYAR 403
>SPBC11C11.05 |||KRE9 family cell wall biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 27.5 bits (58), Expect = 2.0
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = -1
Query: 495 PAGVVATWFTSSTAYLKRNGTVTFITFAPNRSDRDSVTRFRMAW----LSLGHTYSIKPL 328
P G + W+ S T + R G I P+ + + T + W S+ T++ P+
Sbjct: 165 PTGTMRDWYLSQTTGVLRTGP---IQNRPDSTFTAATTDIQPLWETSSYSVFTTFAGPPI 221
Query: 327 NMSTVETGFVSPRLISTGIFPVFGLFANTAAK 232
STV F SP T ++ ++ +A+TA+K
Sbjct: 222 ATSTV---FASP----TYMYTLYANYASTASK 246
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -1
Query: 591 AAVARASPYPTNKLKAVVPNACGTVAMPSSASPAGVVATWFTSSTAYLKRNGTVT 427
A ++ T+ + V+P++ + A P SAS + +T + SST T +
Sbjct: 204 ATISSVVDSATSSVSTVIPSSIISAAPPDSASESTPASTSYASSTTSATSTSTTS 258
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.2 bits (55), Expect = 4.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 184 VAKPEQSGGSGFRQKCFGGSVGKQTKDW 267
+ +P++ GF K + G V TKDW
Sbjct: 561 IYRPKKFSSEGFVLKHYAGDVEYDTKDW 588
>SPAC11E3.12 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 162
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 477 WRRHRPETR-CSAWPLCRRR*EQQLSAYW 560
WR +P R C++W +C++ E+Q ++ W
Sbjct: 78 WRPKKPRVRICNSW-MCQQAAEEQGNSNW 105
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 520 SGHAEQRVSGRCRRHLVHFVHSIF 449
S +QR +GR +VHF+ S+F
Sbjct: 587 STEEQQRTTGRLTVAIVHFIFSVF 610
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 570 PYPTNKLKAVVPNACGTVAMPSSASPAGVVA 478
P P KA P+A T A+P + PAG A
Sbjct: 1885 PPPMALPKAGPPSAAPTSALPPAGPPAGATA 1915
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 679 QMREDVAGEAADGVLGDAREHGVAQLVEAGRR 584
Q DVA +A+D VL D + +E GRR
Sbjct: 722 QNGSDVAKDASDIVLTDDNFSSIVNAIEEGRR 753
>SPAC22G7.07c |||mRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 413
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 588 AVARASPYPTNKLKAVVPNACGTVAMPSSASPAGVVATWFTSSTAYL 448
+VAR+S Y N+ + + + S S GVVA W T+ Y+
Sbjct: 241 SVARSSVYKVNRNLGYLK----ALPIQESLSKTGVVAVWCTNKEKYV 283
>SPBC1347.13c |||ribose methyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 25.4 bits (53), Expect = 8.1
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +2
Query: 50 IQKVFRTHVKLVRSVTSNHSIILNKPQLSIVCKQCAVTSYLRFYSSPSPNNQGGQDSAKN 229
I+ V + H+ + + ++ ++L L++ S L F + NN+ GQDS N
Sbjct: 78 IKSVNKEHLNQITACRPHNGVVLEASSLNV-----PTISDLLFPAGEEYNNKNGQDSPHN 132
Query: 230 VL 235
L
Sbjct: 133 DL 134
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,009,817
Number of Sequences: 5004
Number of extensions: 66960
Number of successful extensions: 187
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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