Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte13a09
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF490975-1|AAQ06433.1| 703|Caenorhabditis elegans ABC7 protein ... 119 2e-27
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 54 1e-07
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 54 1e-07
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 54 1e-07
AF490976-1|AAQ06434.1| 157|Caenorhabditis elegans Y74C10AM.1b p... 51 7e-07
Z83107-1|CAB05506.2| 461|Caenorhabditis elegans Hypothetical pr... 33 0.15
AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical ... 31 0.61
U46675-4|AAB52640.1| 366|Caenorhabditis elegans Endophilin-rela... 29 2.5
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 29 3.3
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 29 3.3
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 29 3.3
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 28 7.6
>AF490975-1|AAQ06433.1| 703|Caenorhabditis elegans ABC7 protein
protein.
Length = 703
Score = 119 bits (286), Expect = 2e-27
Identities = 62/133 (46%), Positives = 87/133 (65%)
Frame = +2
Query: 308 VSTVDMFRGLMEYVWPKDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATT 487
+S + + L+++VWPKD I+ RV ++L LL AK+ NV+VPFL + V+ N A
Sbjct: 74 LSGYQLVQRLLKFVWPKDKPEIKRRVLVALCLLIAAKLANVSVPFLLRDIVNYYNGKA-- 131
Query: 488 PAGDALLGMATVPQALGTTAFSLLVGYGLARATAAGFNELRNAVFARVAQHSIRRLACNV 667
P L T Q + T + + YG+ARATA+ FNELRNAVFA+VAQ+SIR ++ ++
Sbjct: 132 PEFLKLTFDGTPSQTIFTAGIATCIAYGIARATASLFNELRNAVFAKVAQNSIRSISRSI 191
Query: 668 FTHLHNLDLGFHL 706
F HLH+LDL FHL
Sbjct: 192 FLHLHSLDLSFHL 204
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 54.0 bits (124), Expect = 1e-07
Identities = 38/121 (31%), Positives = 61/121 (50%)
Frame = +2
Query: 344 YVWPKDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATV 523
Y+WP + +++ RV L LL +++NV++P L K+ VDE+ T +LL +AT
Sbjct: 214 YIWPTKSISLQLRVVFCLFLLIIGRLINVSLPILSKWIVDELATPDTFQY--SLLFLATF 271
Query: 524 PQALGTTAFSLLVGYGLARATAAGFNELRNAVFARVAQHSIRRLACNVFTHLHNLDLGFH 703
L G G A N +R ++ + Q++ R L +F HLH+L L +H
Sbjct: 272 --------LKFLQGNG---AMGGFLNTVRTYLWIPIQQYTTRELEVELFKHLHSLSLRWH 320
Query: 704 L 706
L
Sbjct: 321 L 321
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 54.0 bits (124), Expect = 1e-07
Identities = 38/121 (31%), Positives = 61/121 (50%)
Frame = +2
Query: 344 YVWPKDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATV 523
Y+WP + +++ RV L LL +++NV++P L K+ VDE+ T +LL +AT
Sbjct: 214 YIWPTKSISLQLRVVFCLFLLIIGRLINVSLPILSKWIVDELATPDTFQY--SLLFLATF 271
Query: 524 PQALGTTAFSLLVGYGLARATAAGFNELRNAVFARVAQHSIRRLACNVFTHLHNLDLGFH 703
L G G A N +R ++ + Q++ R L +F HLH+L L +H
Sbjct: 272 --------LKFLQGNG---AMGGFLNTVRTYLWIPIQQYTTRELEVELFKHLHSLSLRWH 320
Query: 704 L 706
L
Sbjct: 321 L 321
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 54.0 bits (124), Expect = 1e-07
Identities = 38/121 (31%), Positives = 61/121 (50%)
Frame = +2
Query: 344 YVWPKDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATV 523
Y+WP + +++ RV L LL +++NV++P L K+ VDE+ T +LL +AT
Sbjct: 214 YIWPTKSISLQLRVVFCLFLLIIGRLINVSLPILSKWIVDELATPDTFQY--SLLFLATF 271
Query: 524 PQALGTTAFSLLVGYGLARATAAGFNELRNAVFARVAQHSIRRLACNVFTHLHNLDLGFH 703
L G G A N +R ++ + Q++ R L +F HLH+L L +H
Sbjct: 272 --------LKFLQGNG---AMGGFLNTVRTYLWIPIQQYTTRELEVELFKHLHSLSLRWH 320
Query: 704 L 706
L
Sbjct: 321 L 321
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 54.0 bits (124), Expect = 1e-07
Identities = 38/121 (31%), Positives = 61/121 (50%)
Frame = +2
Query: 344 YVWPKDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVNQVATTPAGDALLGMATV 523
Y+WP + +++ RV L LL +++NV++P L K+ VDE+ T +LL +AT
Sbjct: 214 YIWPTKSISLQLRVVFCLFLLIIGRLINVSLPILSKWIVDELATPDTFQY--SLLFLATF 271
Query: 524 PQALGTTAFSLLVGYGLARATAAGFNELRNAVFARVAQHSIRRLACNVFTHLHNLDLGFH 703
L G G A N +R ++ + Q++ R L +F HLH+L L +H
Sbjct: 272 --------LKFLQGNG---AMGGFLNTVRTYLWIPIQQYTTRELEVELFKHLHSLSLRWH 320
Query: 704 L 706
L
Sbjct: 321 L 321
>AF490976-1|AAQ06434.1| 157|Caenorhabditis elegans Y74C10AM.1b
protein protein.
Length = 157
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +2
Query: 308 VSTVDMFRGLMEYVWPKDNQAIRNRVTLSLSLLFGAKVMNVTVPFLFKYAVDEVN 472
+S + + L+++VWPKD I+ RV ++L LL AK+ NV+VPFL + V+ N
Sbjct: 74 LSGYQLVQRLLKFVWPKDKPEIKRRVLVALCLLIAAKLANVSVPFLLRDIVNYYN 128
>Z83107-1|CAB05506.2| 461|Caenorhabditis elegans Hypothetical
protein F32A7.3a protein.
Length = 461
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 326 TCPQWKQVSYHPGLYQRVFSQSLVCLPTLPPKHFWRNPDP 207
+CP+ Q+S G Y RV ++ +C P KH N DP
Sbjct: 64 SCPRNTQISVQTGFYGRVVPENQLCPPQAGRKHSEANLDP 103
>AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical
protein Y46G5A.12 protein.
Length = 237
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 706 EMEAEVQVVQMREDVAGEAADGVLGDA 626
E E + +++ M+E+V G+A D LGDA
Sbjct: 128 EFEKQSEIMDMKEEVMGDAIDDALGDA 154
>U46675-4|AAB52640.1| 366|Caenorhabditis elegans Endophilin-related
protein protein1, isoform a protein.
Length = 366
Score = 29.5 bits (63), Expect = 2.5
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +2
Query: 26 VALLINKRIQKVFRTHVKLVRS-VTSNHSIILNKPQLSI-VCKQCAVTSYLRFYSSPSPN 199
+ L+ + IQ +K +R V + S QL + ++ + T R S+ N
Sbjct: 220 ITKLLLEGIQTAHNNQLKCLRDFVEAQMSFYAQSHQLMADLQRELSGTMSFRGSSAILVN 279
Query: 200 NQGGQDSAKNVLAAVLANKPKTGKIPVDISLGDTKPVSTVD 322
N G + + + AA+ A KP +G +P D+ K + D
Sbjct: 280 NSGDPPNGRTMAAAIAAAKP-SGLLPDDLGTKQAKVIMDYD 319
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 59 VFRTHVKLVRSVTSNHSIILNKPQ---LSIVCKQCAVTSYLRFYSSPSPNNQG 208
+F + V+LV+ SN+ I + L QC V + Y +PSPNN+G
Sbjct: 862 IFNSTVELVQYYRSNNLIEIFAALDTCLKNPYSQCKVFKAVHDYDAPSPNNEG 914
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 59 VFRTHVKLVRSVTSNHSIILNKPQ---LSIVCKQCAVTSYLRFYSSPSPNNQG 208
+F + V+LV+ SN+ I + L QC V + Y +PSPNN+G
Sbjct: 894 IFNSTVELVQYYRSNNLIEIFAALDTCLKNPYSQCKVFKAVHDYDAPSPNNEG 946
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 59 VFRTHVKLVRSVTSNHSIILNKPQ---LSIVCKQCAVTSYLRFYSSPSPNNQG 208
+F + V+LV+ SN+ I + L QC V + Y +PSPNN+G
Sbjct: 894 IFNSTVELVQYYRSNNLIEIFAALDTCLKNPYSQCKVFKAVHDYDAPSPNNEG 946
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -1
Query: 624 ANTALRSSLKPAAVARASPYPTNKLKAVVPNACGTVAMPSSASPAGVVATWFTSSTA 454
A+ A + PA A +P P + + P+A G A A+PA V T +S+A
Sbjct: 410 ASAAAEETPAPAPAAEETPAP--ETASAAPDAAGGAAPADVAAPADVATTAPETSSA 464
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,915,804
Number of Sequences: 27780
Number of extensions: 390307
Number of successful extensions: 1095
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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